Ornithinimicrobium cryptoxanthini: NF557_09755
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Entry
NF557_09755 CDS
T08994
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ocp
Ornithinimicrobium cryptoxanthini
Pathway
ocp03030
DNA replication
ocp03410
Base excision repair
ocp03420
Nucleotide excision repair
ocp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NF557_09755 (polA)
03410 Base excision repair
NF557_09755 (polA)
03420 Nucleotide excision repair
NF557_09755 (polA)
03440 Homologous recombination
NF557_09755 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocp03032
]
NF557_09755 (polA)
03400 DNA repair and recombination proteins [BR:
ocp03400
]
NF557_09755 (polA)
Enzymes [BR:
ocp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NF557_09755 (polA)
DNA replication proteins [BR:
ocp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NF557_09755 (polA)
DNA repair and recombination proteins [BR:
ocp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NF557_09755 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NF557_09755 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
USQ74944
LinkDB
All DBs
Position
complement(2122903..2125575)
Genome browser
AA seq
890 aa
AA seq
DB search
MSRLLLLDGHSLAYRAFFALPVENFSTTTGQSTNAVFGFTSMLINVMRDEAPTHIAVAFD
VSRQTFRTTEYPEYKAGRSATPSEFKGQIPIIREVLDALRIPHVELDGFEADDILATLTS
RAREDGMEVLICSGDRDALQLVGDKVTVLYPRKGVSDLARMTPAAVSEKYGVGPELYSDL
AALVGESSDNLPGVPGVGPKTAAKWINQFGDLSGIVTNADQLSGKAGQSLRDHLDGVLRN
RRLNQLVGDLELPLQLADLERRVWDREEIHTVFDRLEFRVLRDRLFEYLDPVEDEADEGF
EVTGGRLEPAEMPAWLTEHAPAGTRTGVHVSGSWGRGVGDATGLGLATSEAAGYVSLADL
DEAAEAALAAWLADPEVPKVAHDVKGPLHALRSRGLPLAGLVSDTALAAYLVRPDQRSYD
LADLVLRYLKRELRAEEGSTDQGLLDLDLGQDDAAVQSSIVHARAALDLAQALDSEIADV
QGSGLLADLELPLIGVLGTMERVGIAVDLEALERLESEFADAMSQAQQDAWDAIGDDTVN
LGSPKQLQTVLFDTLGLPKTRRTKTGYTTDADALAGLYAQTEHQFLEALLRHRDKSRLRV
TAEGLIRSVADDGRIHTTYQQTIAATGRLSSTEPNLQNIPIRTEEGRRIREAFVVGAGYD
ALLSADYSQIEMRIMAHLSGDEGLIEAFRTGEDLHRFVGSRVFGVEPADVTAEMRSKVKA
MSYGLAYGLSAFGLSKQLGISTGEASALMEEYFARFGGVRDYLRDVVAEARGTGFTETML
GRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKVAMLRVDEALRREGHSARMLLQ
VHDELVLEVPSAEKAAVEELVRREMGAATELAVPLDVSVGWGRTWHDAAH
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgactgctactgctggacggacattcactggcctaccgcgcgttcttcgcgctg
ccggtggagaacttctcgaccacgacggggcagagcaccaacgcggtcttcgggttcacc
tccatgctcatcaacgtgatgcgggacgaggcccccacgcacatcgccgtggccttcgac
gtgtcccggcagaccttccgcaccaccgagtaccccgaatacaaggctggacgctcggcg
accccctcggagttcaagggccagatccccatcatccgcgaggtcctggacgcgctgcgg
atcccgcacgtcgagctcgacgggttcgaggccgacgacatcctcgccaccctgacctcc
cgggcgcgcgaggacgggatggaggtgctcatctgcagtggtgaccgggacgcgttgcag
ctggtgggggacaaggtgaccgtgctctacccgcgcaagggcgtctccgacctggctcgg
atgaccccggccgcggtgagtgagaagtatggcgtgggtcccgagctctactccgacctg
gcagcgctggtcggtgagtcctccgacaacctcccgggtgtgcctggggtggggcccaag
acggccgccaagtggatcaaccagttcggcgacctgagtgggatcgtcaccaacgccgac
cagctcagcggcaaggccggccagtccctgcgcgaccacctggacggcgtgctgcgcaac
cgccggctcaaccagctggtcggtgacctcgagctgccgctgcagctggcggacctcgag
cgtcgcgtgtgggaccgcgaggagatccacaccgtcttcgaccgcctggagttccgggtg
ctgcgggaccggctcttcgaatacctcgacccggtggaggacgaggccgacgaaggcttc
gaggtgaccggcgggcgtctcgagcctgcggagatgcccgcctggttgaccgagcacgcg
ccagcgggcacgcgcaccggtgtgcacgtcagcggcagctggggccggggcgtcggggac
gcgaccggccttggcctggccacctccgaggctgcgggttatgtgagcctggccgacctc
gacgaggccgccgaggccgccctggcggcctggctggctgatcccgaggtgcccaaggtg
gcgcatgacgtcaaggggccgctgcacgcgctccgctcccgggggctgcccctggccggt
ctggtcagcgacaccgctctggcggcctacctggtccgccccgaccagcgctcctatgac
ctggccgacctggtgctgcgttatctcaagcgtgagctgcgggccgaggagggcagcacg
gaccaaggcctgctcgatcttgacctcgggcaggacgacgcggccgtgcagtcctcgatc
gtgcacgcccgtgcggcgctcgacctggcgcaggccctggactccgagatcgccgacgtg
cagggctcgggtctgctcgccgatctggagctgcccctgatcggtgtcctgggcaccatg
gaacgcgtcgggatcgccgtggacctggaggcactggagcgcctggagtcggagttcgcg
gacgcgatgtcccaggcccagcaggatgcctgggacgccatcggtgacgacaccgtcaac
ctggggtcacccaaacagctgcagaccgttctgttcgacacgctgggactgcccaagacc
cgacggaccaagaccggctacacgactgacgccgacgcgctggccgggctctatgcccag
acggagcaccagttcctggaggcgctgctgcgccaccgcgacaagtcccggctgcgggtg
accgccgagggcctgatcaggtcggtggccgatgacgggcgcatccacacgacataccag
cagaccatcgcggccaccggtcgtctgagctccaccgagccaaatctgcagaacatccca
atccgcacggaggagggccgccgcatccgtgaggccttcgtcgtgggggctggctacgac
gcgctgctgtcggcggactacagccagatcgagatgcgcatcatggcgcacctctcgggc
gacgagggcctcatcgaggcgttccgcacgggtgaggacctgcaccggttcgtgggctcc
agggtctttggggtcgagccggcggacgtcacggccgagatgcgctccaaggtcaaggcg
atgagctacggcctggcctacggcctgtccgccttcggcctgtccaagcagctgggcatc
tccaccggtgaggccagcgccctgatggaggagtacttcgcccggttcgggggagtgcgc
gactacctgcgcgatgtggtcgccgaggcccgcggcaccgggttcaccgagacgatgctc
ggccggcgcagatatctgcccgacctgacctcggacaaccggcagcgccgggagatggcc
gagcggatggccctgaacgccccgatccaggggtctgccgctgacatcatcaaggtcgcc
atgctgcgcgttgatgaggccctgcgacgtgagggtcactcggcccggatgctgctccag
gtccacgacgagctcgtcctcgaggtgccgtcggccgagaaggccgccgtcgaggagctc
gtgcgacgtgagatgggcgccgccacggagctggcggtccctctcgacgtcagcgtcggg
tggggacggacctggcacgacgctgcccactga
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