Ornithinimicrobium cryptoxanthini: NF557_12135
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Entry
NF557_12135 CDS
T08994
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ocp
Ornithinimicrobium cryptoxanthini
Brite
KEGG Orthology (KO) [BR:
ocp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocp03032
]
NF557_12135
03400 DNA repair and recombination proteins [BR:
ocp03400
]
NF557_12135
Enzymes [BR:
ocp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NF557_12135
DNA replication proteins [BR:
ocp03032
]
Prokaryotic type
DNA Topoisomerases
NF557_12135
DNA repair and recombination proteins [BR:
ocp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NF557_12135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
USQ75367
LinkDB
All DBs
Position
complement(2634021..2635037)
Genome browser
AA seq
338 aa
AA seq
DB search
MPRLRRADLDAPGITRRRRGRGFSYAGPTGRAVGAAVKERIDALAIPPAWRDVWISPDEL
THIQAIGTDDAGRRQYIYHPGWSQKQADAKHDRVVAMARRLPTVRAQITKDLRSDGLTSE
RVLAGMLRMLDSGAFRTGGEAYAEEHDTHGVATLLREHVSVKGTAVRFSFVAKGGLDRDV
TLKDKDLSELVKALRRARTGTDRLFCYRPAAGGDWREVHADDINTRFKELAGEECSVKDL
RTWQATVRAALYLAEAQEPASDTERRRILREVMSRVADDLGNTPAVARGSYVDPRVVSAQ
ESGRTIAAAIERVGSDNLDRPHVRAKLERAVIRLLSTS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccccggctgcgccgcgccgaccttgatgccccgggcatcacccggcgccgtcgcggc
cggggcttcagctatgccggaccgaccgggcgtgcggtgggtgccgcggtcaaagaacgc
atcgatgccctggcgatcccacccgcgtggcgggacgtgtggatcagtcccgacgagctg
acccacatccaggcgatcggcaccgacgacgcgggccggcggcaatacatctatcacccc
gggtggtcgcagaagcaggccgatgccaagcacgaccgggtcgtcgcgatggcccggcgg
ctcccgaccgtgcgtgcgcagatcaccaaggacctgcgctcggacggcctgacctccgag
cgggtgctggccgggatgctgcggatgctggactccggcgcgttccgcaccggtggcgag
gcgtatgccgaggagcacgacacgcacggcgtcgccacgctgctgcgcgagcacgtctct
gtcaagggcacggccgtgcggttcagcttcgtcgccaaggggggtctggaccgggatgtc
acgctcaaggacaaggacctgtccgagctggtcaaggcactgcgccgtgcgcgcaccggg
acggaccggttgttctgctatcgccccgcggccggcggcgactggcgcgaggtgcacgcc
gacgacatcaacaccaggttcaaggagctcgcgggggaggagtgctcggtcaaggacctg
cgcacgtggcaggcgacggtgcgggcggcgctctatctggcggaggcgcaggagccggcc
agcgacaccgagcggcgtcggatcctgcgtgaggtgatgagcagggttgctgacgacctg
ggcaacacccccgcggtggcccggggctcctatgtcgacccgcgcgtggtgagcgcccag
gagtccggtcgcaccatcgccgcagcgatcgagcgcgtcggctcggacaacctggaccgc
ccgcacgtgcgcgccaagctcgagcgtgcggtgatccggctgctgtcgacgagctga
DBGET
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