Ornithinimicrobium cryptoxanthini: NF557_13995
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Entry
NF557_13995 CDS
T08994
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ocp
Ornithinimicrobium cryptoxanthini
Pathway
ocp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NF557_13995 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocp03021
]
NF557_13995 (rho)
03019 Messenger RNA biogenesis [BR:
ocp03019
]
NF557_13995 (rho)
Transcription machinery [BR:
ocp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NF557_13995 (rho)
Messenger RNA biogenesis [BR:
ocp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NF557_13995 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
NACHT
Spore_III_AA
AAA_25
ResIII
S1CSD-TOTE-2
AAA_22
SAP
Motif
Other DBs
NCBI-ProteinID:
USQ78089
UniProt:
A0ABY4YN34
LinkDB
All DBs
Position
complement(3038949..3041072)
Genome browser
AA seq
707 aa
AA seq
DB search
MRVAELQALAGSMGITVSPKMRKADLVEAIRARGGASADGAGRQARSASSAESGTSTPSS
TSTPAEQSSTDGAQETPEAGQRPQRRSRRVAAAAGAPAARRTESDSADRGSEASSAPAEE
QAAPQRAEREGQDGRQTERDNRRGDNDAQAESAQGDDESRQDRNRQDNRRDNRQGGNRNQ
GGDNRQGGGGDNRNQGGDDNRNQGGDDNRNQGGDDNNRNQGRNRNQGGDDNRNQGDDNRS
QGGNRNQGGDDNNRNQGGNRNQQGGNQNQQGGNQNRRYDDDEDGGRSGRRRSRQRGRDRK
RGRSQGGDNYAEEQESTYTEEDVLVPVAGVLDVLDSYGFIRTTGYLPGPSDVYVPMGMVR
KNGLRKGDAVTGAIKAGDQQQHSGGRGDRQKYNALVRLDSVNGQSPEEAKARPEFAKLTP
LYPQDRLRLETEQKNLTTRMIDLVSPIGKGQRGLIVSPPKAGKTLVLQSIANAITQNNPE
AHLMIVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVEMGGDVV
VLLDSITRLGRAYNLAAPASGRILSGGVDSSALYPPKRFFGAARNIEHGGSLTILATALV
ETGSKMDEVIFEEFKGTGNMELRLSRQLADRRIFPAIDVNPSGTRREEILMGGDELKIMW
KLRRVLSALDSMQAVELLLDRLRKTKSNHEFLVQVQQTSSIKLDDED
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgctgagctgcaggctctcgccgggagcatgggcatcaccgtctccccgaag
atgcgcaaggcggacctcgtcgaggccatccgtgcgcgcggcggggcctcggcggacggc
gccgggcggcaggcacgctccgcgagcagtgccgagagcggcacctcaacgccgagcagc
acgtcgacccccgcggagcagagctccacggacggggcgcaagagaccccggaggccggg
cagcgtccgcagcgtcgttcgcgccgcgtcgcggccgcagccggtgcgccggccgcccgc
cgcacggagtccgactccgccgaccgcggcagcgaggcctcctcggccccggccgaggag
caggccgctccgcagcgtgctgagcgcgagggtcaggacggccgccagaccgagcgcgac
aaccgccggggcgacaacgacgcccaggccgagagcgcccagggtgacgacgagagccgt
caggaccgcaaccgccaggacaaccgccgggacaaccgtcagggtggcaaccgcaaccag
ggcggggacaaccgtcagggtggtggcggcgacaaccgcaaccagggtggcgacgacaac
cgcaaccagggcggggacgacaaccgcaaccagggtggcgacgacaacaaccgcaaccag
ggacgcaaccgcaaccagggcggcgacgacaaccgcaaccagggcgacgacaaccgcagt
cagggtggcaaccgcaaccagggcggcgacgacaacaaccgcaaccagggcggcaaccgc
aaccagcagggcggcaaccagaaccagcagggcggcaaccagaaccgccgctatgacgac
gacgaggatggtggccgcagtggccgtcgccgcagccgtcagcggggccgggaccgcaag
cgcgggcgcagccagggtggggacaactacgccgaggagcaggagagcacctacaccgag
gaagacgtgctggtgcccgtcgccggtgtgctcgacgtcctggacagctatggcttcatc
cgcacgaccggctacctgcccgggcccagcgacgtctatgtcccgatgggcatggtccgc
aagaacggcctgcgcaagggtgacgccgtcaccggtgccatcaaggccggcgaccagcag
cagcactccggtggccgtggcgaccggcagaagtacaacgcgctcgtccggctcgactcg
gtcaacggccagagcccggaggaggccaaggcacgcccggagttcgccaagctgacgccg
ctctatccgcaggaccgcctgcgcctggagaccgagcagaagaacctgacgacccggatg
atcgacctggtcagcccgatcggcaagggccagcgcggtctgatcgtctccccgccgaag
gccggcaagaccctggtgctgcagtcgatcgccaacgcgatcacgcagaacaacccggag
gcgcacctgatgatcgtcctggtggacgagcgtccggaggaggtcacggacatgcagcgc
acggtcaagggtgaggtcatcgcctccaccttcgaccgccctgccgaggaccacaccacg
gtggccgagttggccatcgagcgtgccaagcgtctggtcgagatgggcggcgacgtggtc
gtcctgctcgactcgatcacccgcctgggtcgtgcctacaacctcgcggctcccgccagt
ggccggatcctgtccggtggtgtcgactccagcgccctctatccgccgaagcgcttcttc
ggagccgcccgcaacatcgagcacggtggctcgctgaccatcctggcgacggcgctcgtg
gagaccggctccaagatggacgaggtcatcttcgaggagttcaagggcaccggcaacatg
gagctgcggctgtcccgccagctggcggaccgccgcatcttcccggccatcgacgtcaac
ccctccggcacccgccgcgaggagatcctgatgggtggggacgagctcaagatcatgtgg
aagctgcgtcgcgtgctctccgcgcttgactccatgcaggccgtcgagctgctgctggac
cgcctgcgcaagaccaagtccaaccacgagttcctcgtgcaggtgcagcagacctcctcg
atcaagctggacgacgaggactga
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