Ornithinimicrobium cryptoxanthini: NF557_16345
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Entry
NF557_16345 CDS
T08994
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ocp
Ornithinimicrobium cryptoxanthini
Pathway
ocp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NF557_16345 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocp03400
]
NF557_16345 (recC)
Enzymes [BR:
ocp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NF557_16345 (recC)
DNA repair and recombination proteins [BR:
ocp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NF557_16345 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
USQ76136
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All DBs
Position
3537713..3541225
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AA seq
1170 aa
AA seq
DB search
MTLFVHRAANTDLLAGGLAELLAAPLDDVFAEEVVAVPAKGVERWLAQRLSHTLGSGPRG
GDGVCAGVRFLNPHSLVALVLGIERDDPWRSDQLAWPVLRAVDDSLGETWAKTLSDHLGH
GLTGTEHELRRGQRFAVARRLAGLFADYAAQRPAMLADWREGGAGDGLGGPVADDLAWQP
ELWRRTLALVDAEPPEVRQTRVLQALREQSPEGLSLGDLVLPGRLSLFGHTRIARSEVEV
LTALGEHLDVHLWLPQSSPRAWTRLAPLAAEGPVPRAEDTSAGVIEHPLLASLGRDSREL
QRTLALTGGTDDLLVRDEADDVVVRDEADDVLVRDEADEAPARSLLQLLQDDLARDHAPT
AEDRRSRVVEAQDRSIQVHACHGRTRQVEVLRDVLADLLQRDPTLEPRDILVMCPDVDTY
APLFHAGFGLAEVVREQTAATHPAHGLRVRLADRGPRHTNPLLALADQLVELAGGRLTAG
EVLDLARSAPVRHRFGLGDDSLERLGDWVHAVVIRWGLDADHRATYQLHHLGQNTWRAGL
DRVLVGAAVDGQDIDHLGTTLALDNLDSGDLELAGRLAELVERLATTLRALRTTDTVDVW
VRELSDGVLGLADVPLADAWQLTQFERELARIQAAARRGATSTPSLSLADVRALLREQSG
GRATRSNFRTGSLTVCTMVPMRSVPHRVVALVGMDDGVFPRHSTPDGDDALARRAVTGER
DPRSEDRQLLLDAITSAGDALVITYTGADEHTGSQRPPAVPLGELIDAVRATAQGQGVER
VVTDHPLQPFDPRNLGVTPEDETSLLPQDRPLSYDPTALAGALALRAGQSQPVPIAAQLL
PPLAGDEVALDDLLRFFDNPARAFLRSRLGMVLPEVPEERGEGIPITLDGLEKWTIGDRM
LQGVLTGRAPAQAVNAELWRGALPPDQLGETTMREITQAVQALCEATWRTVGTGGWEQDL
PRDSVDLDLALPGGRQLTGTVAGLVGGAALTVTYSQVKAKQRLRSWIISLVLAAGGHSGV
SRLIGKHYWRKGDKSPVLFTHGPHDPATALELLTQLVDLRDRGLREVVPLPLETSLAWAD
YFVKTGKATLAAQQGVKKWVTPDGGFGGGGEQDDPSWSRVLGAGVPFDTILGTPRADEEW
TPGVESRLGQFALRVWGPVLRGGAESKVKP
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgttcgtgcaccgcgcggccaacaccgacctgttggccggcgggcttgccgag
ctcctcgcggccccgctggacgacgtgttcgccgaggaggtcgtcgcggtgccggccaag
ggggtggagcggtggctggcccagcggctgtcgcacacgctggggtccgggccgcgcggc
ggcgacggggtgtgcgccggtgtgcgtttcctcaacccgcactcgctggtcgcgctcgtc
ctgggcatcgagcgcgatgacccgtggcgctccgaccagctcgcctggccggtgctgcgc
gcggtcgacgacagcctcggcgagacgtgggccaagaccctgtccgaccacctgggacac
ggcctcaccggcaccgagcatgaactgcgccggggtcagcgatttgccgtggcgcgccgg
ctcgccggcctgttcgccgactatgccgcccagcgccccgcgatgctggcggactggcgt
gagggtggcgccggtgacgggctgggtggtccggtggccgacgacctcgcctggcagccc
gagctgtggcgccgcacgttggccctggtcgacgccgagccccccgaggtgcggcagaca
cgcgtcctgcaggcgctgcgggagcagagccccgagggcctgtccctcggtgatctggtg
ctgcccgggcgcctgtccctgttcggacacacccggatcgcgcgcagcgaggtcgaggtg
ctgaccgccctgggcgagcacctggacgtgcacctgtggctgccgcagtcctccccccgg
gcgtggacgcggctggctccgctcgcggcagagggcccggtcccccgcgcggaggacacg
tccgccggggtgatcgagcacccgctgctggccagcctcgggcgcgactcccgcgagctg
cagcgcaccctcgccctcacgggtgggaccgacgacctgctggtccgcgacgaggccgac
gacgtggtggtccgcgacgaggccgacgacgtgctggtccgcgacgaggccgacgaggca
ccggcccgcagtctgctacagctcctgcaggacgacctggcgcgcgaccacgcaccgacc
gctgaggaccgccggtctcgggtggtcgaggcgcaggaccgcagcatccaggtgcatgcc
tgccacgggcgcacccggcaggtcgaggtgctgcgcgacgtgctggccgacctcctccag
cgcgaccccaccctcgagccgcgcgacatcctggtgatgtgccccgacgtggacacctat
gcgcccctcttccacgccggcttcgggctcgccgaggtggtccgcgagcagaccgccgcg
acacacccggcccacggcctgcgggtccggctcgcggaccgcggccctcggcataccaac
cctctgctggccctggccgaccagctcgtcgagctggctggcgggcgcctgaccgccggg
gaggtgctcgacctggcccgatccgcccctgttcgccaccggttcggcctcggtgacgac
tccctcgagcgactgggggactgggtccacgcagtggtcatccggtgggggctcgacgcc
gaccaccgggccacctatcagctgcaccatctgggtcagaacacctggcgcgcggggctg
gaccgggtgctggtgggcgcggccgtcgacggtcaggacatcgaccacctcgggaccacc
ctggcgctggacaacctcgacagtggtgacctcgagctggccgggcgcctggctgagctc
gtggagcggctggccacgaccctgcgcgctctgcgcacgaccgacacggtcgatgtctgg
gtgcgcgagctgagtgacggggtgctcgggctggccgatgtgccgctcgcggacgcctgg
cagctcacccagttcgagcgtgagctggccaggatccaggcggctgcacggcggggtgcc
acgtcgacgccgtccctgtcgctggccgacgtccgtgcgctgctgcgggagcagtccgga
ggacgggcgacccggtccaacttccgcaccggctcgctcacggtctgcacgatggtgccg
atgcgctccgtgccgcaccgcgtggtggccctggtcgggatggacgacggtgtcttcccc
cggcacagcaccccggacggtgacgacgcgttggcgcggcgcgcggtcaccggcgagcgc
gacccgcgcagcgaggaccggcagctgctgctcgatgcgatcacctcggccggtgacgcg
ctcgtcatcacctacaccggcgccgacgagcacaccggctcacagcggcctccggcggtc
ccgctcggagagctgatcgacgccgtccgcgcgaccgcacagggccagggggtcgagcgc
gtcgtcaccgatcacccgctgcagccgttcgacccgcgcaacctcggcgtcacccccgag
gacgagaccagcctgctgccccaggaccggccgctcagttatgacccgacggctctcgcc
ggggcgctcgctctccgcgcggggcagtcccagcccgtccccatcgcggcccagctgctc
cccccgctggccggcgacgaggtcgcgctcgatgacctgctccggttctttgacaacccg
gcccgcgccttcctgcgctcccgcctcgggatggtcctgcccgaggtccccgaggagcgc
ggcgagggcatcccgatcaccctcgacgggctggagaagtggacgatcggcgaccgcatg
ctgcagggggtgctgaccggccgggctcccgcccaggcggtcaacgccgagctgtggcga
ggcgccctgccgcccgaccagctgggcgagaccaccatgcgtgagatcacccaggcggtc
caggccctgtgcgaggccacctggcgcacggtcggcaccggcgggtgggagcaggacctg
ccgcgcgacagtgtggacctcgacctcgcgctgcccggcggtcgccagctcaccggcacc
gtcgccgggctcgtgggaggcgcagcgctgaccgtcacctactcgcaggtgaaggccaaa
caacgcctccgctcctggatcatctcgctggtcctggctgcgggcggacactccggggtg
agccgtctgatcggcaagcactactggcgcaagggcgacaagagccctgtgctgttcact
cacgggccgcacgacccggccacggcactggagctgttgacccagctcgtcgacctgcgc
gacagaggcctgcgtgaggtcgtcccgctgccgctggagaccagcctggcctgggcggac
tacttcgtgaagacgggcaaggccacgctggctgcacaacagggcgtcaagaagtgggtc
acccccgacggcggcttcggtggcggcggtgagcaagacgatccgtcctggtcacgtgtg
ctgggagcgggcgtgccctttgacacgatcctcggcacgccacgcgccgatgaggagtgg
acgccgggggtggagtcgcggctgggtcagttcgcgctgcgggtgtggggcccggtgctc
cgaggcggcgcagagtcgaaagtgaagccatga
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