Ornithinimicrobium cryptoxanthini: NF557_16575
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Entry
NF557_16575 CDS
T08994
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ocp
Ornithinimicrobium cryptoxanthini
Brite
KEGG Orthology (KO) [BR:
ocp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocp03016
]
NF557_16575 (thpR)
Enzymes [BR:
ocp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NF557_16575 (thpR)
Transfer RNA biogenesis [BR:
ocp03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NF557_16575 (thpR)
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
USQ76179
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All DBs
Position
complement(3588442..3589011)
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AA seq
189 aa
AA seq
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MRAFFAVLPPAEVLQDLAAYLEPRREADTERVWRWTRTQHLHLTLAFLADLPDWREEELI
ASGDEWAARQQPVRMSWGGAGAFPDPGAAKVMWVGVTGEETRRELAAWSRALRDQANHAG
ADVDGQRFTPHVTVARSARRVSAGRWVQALDAYESVEFVVDEVALVQSHLGEGPGRSPRY
EVRHTFSLG
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgttctttgcggtgctgccgccggctgaggtgctccaggacctggcggcctat
ctggagccgcgccgggaggctgacaccgagcgcgtgtggcggtggacccgcacccagcac
ctgcacctgacccttgcgttcctggccgacctgcccgactggcgcgaggaggagctgatc
gccagcggagacgagtgggcggccaggcaacaaccggtccgtatgtcgtggggcggggct
ggcgccttccctgacccgggtgcggcaaaggtgatgtgggtcggggtgaccggggaggag
acacgccgtgagctggcggcctggtcacgggcgctgcgcgaccaggccaaccacgccggg
gccgacgtcgacggccagcgcttcacaccccacgtgacggtcgcgcgctccgcccgccgg
gtcagcgccggccgctgggtgcaggcgctggacgcctatgagtctgtcgagttcgtcgtc
gatgaggtcgccctcgtgcagtcgcacctgggcgagggccccgggcgctcgccacgctat
gaggtccggcacacgttctcgctggggtga
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