Ornithinimicrobium cryptoxanthini: NF557_17415
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Entry
NF557_17415 CDS
T08994
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ocp
Ornithinimicrobium cryptoxanthini
Pathway
ocp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NF557_17415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocp03019
]
NF557_17415
Enzymes [BR:
ocp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NF557_17415
Messenger RNA biogenesis [BR:
ocp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NF557_17415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
GvpK
HTH_24
Motif
Other DBs
NCBI-ProteinID:
USQ76340
LinkDB
All DBs
Position
complement(3753340..3754836)
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AA seq
498 aa
AA seq
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MSPSLTEPELLARALRHLTPVLDLLTDLGARFQDAGHELALVGGPVRDAFLGRTSPDLDF
TTSATPEQIEAALAGWAEQTWDIGREFGTIGARRQGTTVEVTTYRADAYDPDSRKPVVAF
GDNLEDDLVRRDFTVNAMALRLPELVFADPHHGLGDLAQGVLTTPHTAEVSFSDDPLRMM
RAARFTAQLGLTVDDDVRGAMTDMAGRLSIVSAERVRDELSRLLLGADPRAGLELMVDTG
LADVVLPELPALQLEIDEHHRHKDVYQHSLTVLEQAIALEDEPGTEGVDAVVGPDLVLRL
VALLHDIGKPATRRFEKGGGVSFHHHEIVGAKLARSRLRALRYDKETIKAVTRLIELHLR
FHGYGGGEWTDSAVRRYVTDAGPLLGHLHRLTRSDSTTRNRRKAERLARTYDDLEARIAR
LRSQEELSAVRPELNGNEIAEVLGISPGPVLGRAYKHLLGIRLDQGPIGQEAAAEELRRW
WAEQPEAGSSGTEQERQL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccctcattgaccgagcccgagctgctggcccgcgcgctgcgtcacctgacgccc
gtgctcgacctgctgacagacctcggagcgaggttccaggacgccgggcacgagctcgcg
ctggtgggcggaccggtgcgggacgccttcctgggccgcacgtcgcccgacctggacttc
accacctccgcgacgcccgagcagatcgaggcggccctcgcggggtgggccgagcagacc
tgggacatcgggcgggagttcggcacgatcggtgcgcgccggcaggggacgacggtggag
gtcaccacctatcgggccgacgcctacgacccggactcgcgcaagcccgtcgtggccttc
ggggacaacctcgaggacgacctggtccggcgggacttcacggtcaacgcgatggcactg
cggctgcccgagctggtcttcgccgacccgcaccacggactgggtgacctggcgcagggt
gtcctgaccactcctcatacggccgaggtctccttctccgacgacccgctgcggatgatg
cgggcggcccggttcacggcccagctcgggctgaccgtcgacgacgacgtgcgcggcgcg
atgacagacatggccgggcgcctgtcgatcgtctccgccgaacgggtccgggacgagctg
agccgcctgctgctgggcgccgacccccgggccgggctcgagctgatggtcgacaccggc
ctggccgacgtcgtgctgcccgagctgccggccctgcagctggagatcgacgagcaccac
cggcacaaggacgtctatcagcactcgctgacggtgctggagcaggcgatcgcgctggag
gacgagcccggcaccgagggggtggacgccgtggtcggccccgacctggtgctgcgtctg
gtcgccctcctgcacgacatcggcaagcccgcgacgcgccggttcgagaagggcgggggc
gtcagcttccaccaccacgagatcgtcggcgccaagctggcgcggagccggttgcgggcg
ctgcgctatgacaaggagaccatcaaggcggtgacccggctcatcgagctgcacctgcgc
ttccacggctatggcggtggcgagtggaccgactcggcggtgcgccgctatgtcaccgac
gccggtcctttgctgggccacctgcaccggctcacccggtcggactcgaccacccgcaac
cggcgcaaggccgaacggctcgcccggacctatgacgacctcgaggcgcggatcgcccga
ctgcgttcgcaggaggagctgtcggcggtccgaccagagctcaacggcaacgagatcgcc
gaggtgctggggatcagccccggtccggtgctcggccgggcctacaagcacctgctgggc
atccgcctggaccaggggccgatcgggcaggaggccgccgcggaggagctgcggcggtgg
tgggccgagcaaccggaggccggctcctccgggacagagcaggaaagacagttgtga
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