Ochrobactrum sp. MT180101: HGK82_02090
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Entry
HGK82_02090 CDS
T07147
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocr03400
]
HGK82_02090 (radA)
DNA repair and recombination proteins [BR:
ocr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HGK82_02090 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
DnaB_C
AAA_30
AAA_16
AAA_22
AAA
SLFN-g3_helicase
Lon_C
RecA_N
AAA_24
nSTAND3
nSTAND_NTPase5
AAA_5
HepII_C
NTPase_1
MeaB
ABC_tran
ATPase_2
NPHP3_N
AAA_14
SRP54
Elong_Iki1
AAA_19
NACHT
GvpD_P-loop
AAA_29
MCM
CbiA
Hpr_kinase_C
CobU
HypA
NAT10_TcmA_helicase
ArsA_ATPase
Zeta_toxin
Bac_DnaA
NB-ARC
DAP3
Motif
Other DBs
NCBI-ProteinID:
QOD64079
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Position
1:complement(434250..435644)
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AA seq
464 aa
AA seq
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MAKARVQFICQNCGAVHSRWAGKCDSCGEWNTLVEEGTNSGIGSGPGAMLSKRKGRAVAL
TSLSGDIEDAPRIISGISELDRVTGGGFVRGSALLIGGDPGIGKSTLLTQAAAALSNRGH
RIVYVSGEEAVAQIRLRAQRLGVASSAVELAAETNVEDIIATISDTKRPDLVIIDSIQTL
WTDMADSAPGTVTQVRSSAQAMIRYAKQTGSAVVLVGHVTKDGQIAGPRVVEHMVDGVLY
FEGEGGHHYRILRTVKNRFGPTDEIGVFEMSDGGLREVSNPSELFLGERNAKAPGAAVFA
GMEGTRPVLVEIQALVAPSSLGTPRRAVVGWDGGRLAMILAVLESHCGVRFGQHDVYLNV
AGGYRISEPAADIAVAAALVSSMAGIALPPDCVYFGEISLSGAVRAVTHAVQRLKEAEKL
GFRQAEVPGGSGELWKDRNFRLMETSALPDLVARIAASGSGKKQ
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcgcgcgttcaattcatctgccagaattgcggcgcggttcattcgcgctgg
gcgggcaagtgcgattcctgcggcgagtggaacacgcttgtcgaggaaggcaccaatagc
ggcatcgggtctgggcccggcgccatgttgtccaagcgcaaaggtcgcgccgtcgccctc
acctccctgtctggcgacattgaagatgcgccgcggatcatttccggtatcagcgagctt
gaccgggttaccggcggcggattcgtgcgcggttcagcccttctgatcggcggtgatccc
ggcatcggcaaatccacgcttttgacgcaggctgcagccgccctttccaatcgtggccat
cgcattgtctatgtttcgggcgaagaagccgtcgcgcagatacgtctgcgcgcgcagcgt
ctcggcgtggcatcgtcagcggttgagctcgccgcagagaccaatgtcgaagacatcatt
gccaccatttctgataccaagcgacccgatctcgtcatcatcgattcgattcagacgctc
tggaccgatatggcagattctgctcccggcacggtcacgcaggtgcgttcgtcggcacaa
gccatgatccgttatgccaagcagactggttccgcagttgtgctggtgggacatgttacc
aaagacggccagattgcaggccctcgtgtggtcgaacatatggtcgatggtgtcctctat
ttcgaaggtgaaggcggacatcactatcgcatcctgcgcacggtgaaaaaccgttttggc
ccgaccgacgagatcggtgtcttcgagatgtccgatggcggactgcgtgaggtttccaac
ccgtccgagcttttccttggtgaacgtaacgccaaggctccaggtgcagctgtctttgcc
ggcatggaaggcacgcgcccggtgctggtggagatacaggcgcttgtcgccccctcctcg
ctcggcaccccgcgtcgtgcggtcgtgggctgggacggcggacggcttgccatgatcctc
gccgtactcgaatcgcattgcggcgttcgcttcggccagcacgatgtatacctgaatgtc
gcgggcggctatcgtatcagcgagcctgccgccgatattgctgtggctgctgcactggtt
tcatccatggccggtattgcccttccgccagattgtgtttatttcggcgaaatcagcctt
tccggtgctgttcgcgcggtaacgcatgcagtacagaggctcaaggaagctgagaagctc
ggtttccggcaggcagaagtgcccggcggcagcggcgaactttggaaagatcgcaacttc
cggcttatggaaacttcggctctgcccgaccttgttgcgcgcatcgcggcttcaggctcc
ggaaagaagcaataa
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