Ochrobactrum sp. MT180101: HGK82_02515
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Entry
HGK82_02515 CDS
T07147
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr00521
Streptomycin biosynthesis
ocr00523
Polyketide sugar unit biosynthesis
ocr00525
Acarbose and validamycin biosynthesis
ocr00541
Biosynthesis of various nucleotide sugars
ocr01100
Metabolic pathways
ocr01110
Biosynthesis of secondary metabolites
ocr01250
Biosynthesis of nucleotide sugars
Module
ocr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HGK82_02515 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HGK82_02515 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HGK82_02515 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HGK82_02515 (rfbB)
00525 Acarbose and validamycin biosynthesis
HGK82_02515 (rfbB)
Enzymes [BR:
ocr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HGK82_02515 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
NAD_binding_10
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
QOD64156
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Position
1:533216..534292
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AA seq
358 aa
AA seq
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MNILVTGGAGFIGSAVCRHLASDPKVNVVNLDKLTYAGNLASLRQIENHPNYSFLQADIC
DDTGVLEALRTNEIDVVMHLAAESHVDRSIDGPGAFIETNIVGTFRLLNAALAYWRELPE
PRKSAFRFHHISTDEVFGDLPFDSGIFTEETPYQPSSPYSASKAASDHLVRAWHETYGLP
VVLTNCSNNYGPFHFPEKLIPLVILNALDEKPLPVYGAGANVRDWLYVEDHARALALVAT
TGKLGESYNIGGRAERTNLNVVETICAILDKKRPRANGKSYADLITFVTDRPGHDRRYAI
DASKIERELGWKPQETFETGLEKTIQWYLDNGWWWEPIRSGTYAGERLGSTPAKEVKA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcttgttaccggtggcgcgggcttcattggttctgcagtgtgccgtcatctg
gcgtcagatcccaaggtcaatgtcgtcaatctcgacaagctgacctatgcaggcaatctg
gcgtctctccgtcagatcgaaaaccacccgaattacagctttcttcaggccgacatctgc
gatgataccggtgttctggaagccttgcgtaccaatgaaatcgatgtggtcatgcatttg
gctgcggaaagccacgttgaccgttccatcgatggtccaggtgcattcatcgaaacgaat
attgtgggaacgttccgcctgctcaatgctgcactcgcctattggcgggaactgcctgag
ccgcgcaagtcggctttccggtttcatcatatttcgacagatgaagtgtttggcgatctg
ccgttcgacagcggcattttcacggaagaaactccgtatcagccgtcgtcgccttattcg
gcttcgaaagctgcgtccgatcatctggtgcgcgcatggcatgaaacctatggcctgccg
gtcgttctgaccaattgctcgaacaattatgggccgttccatttccccgaaaagctgata
ccgcttgtcattctcaatgcactcgatgaaaagccgctgcctgtttatggcgcaggggcg
aatgtgcgtgactggctctatgtagaggaccacgcccgtgctctggcactggtcgcaacc
acaggcaagctgggtgaaagctacaatatcggtgggcgcgcagaacgtaccaatctgaat
gtggtcgaaacgatctgcgctattctcgacaagaagcggcctcgcgcaaacggcaagagc
tatgccgacctgatcaccttcgtgacggatcgccccggtcatgaccgtcgttatgcaatt
gatgcctcaaagatcgagcgtgaactgggctggaagccacaggaaactttcgagaccggt
ttggaaaaaaccattcagtggtatctcgacaatggctggtggtgggagccgatccgcagc
ggcacctatgcgggcgaacgtcttggcagcacgcctgccaaagaggtcaaggcatga
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