Ochrobactrum sp. MT180101: HGK82_04370
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Entry
HGK82_04370 CDS
T07147
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HGK82_04370 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocr03400
]
HGK82_04370 (xth)
Enzymes [BR:
ocr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HGK82_04370 (xth)
DNA repair and recombination proteins [BR:
ocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HGK82_04370 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QOD64480
LinkDB
All DBs
Position
1:complement(909413..910195)
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AA seq
260 aa
AA seq
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MKIATWNINGVKARIENLQHWLKESSPDIACLQEIKSVDDQFPRLEIEALGYHVETHGQK
GFNGVALLSKKSPDEVNRGLPGDDGDEQARFIEGVYSTDKGVVRVVSLYLPNGNPVDTEK
FPYKLSWMQRLELWAKDRLALEEPLVLAGDYNVIPEPDDAKNPEQWVGDALFKPQSRQAF
RRLENLGFTDAIRASTDDSGIYSFWDYQAGAWQKNNGIRIDHLMLSPEAANRFISSDVEK
HVRAWEKPSDHVPVTITLSV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcgacctggaacatcaacggcgtcaaagcccgtatcgagaacctccagcac
tggctgaaggagtcctcgcccgatattgcctgcctgcaggaaatcaagtcggtcgatgac
cagtttccgcgcctggagattgaagcgctcggctatcatgtggaaacacacggccaaaag
ggcttcaacggcgtcgcgcttctttccaagaaatcaccggatgaggtcaatcgcggtctt
cccggcgacgatggcgatgagcaggcacgtttcatcgaaggcgtctactcgacagacaag
ggcgttgtccgcgtcgtttcactttacctgccgaacggcaatcccgtggacacggagaaa
tttccatacaagctttcgtggatgcagcggcttgagctgtgggcgaaagatcgccttgct
cttgaagaacctttggtgcttgccggtgactataacgtcattcccgagccggacgatgcc
aagaatcccgagcagtgggtgggcgacgcgctcttcaagccacaatcgcgccaggcattc
cgcaggcttgaaaatctgggctttaccgatgcaatccgtgcgtcaaccgacgatagcggg
atttactcgttctgggattatcaggctggtgcctggcagaagaacaacggcatccgtatc
gaccatctgatgctgtcgccggaggcggccaatcgtttcatatcgagtgatgtggaaaag
cacgttcgtgcgtgggagaagccatccgaccatgtgccggtgacgataacgctttcggtc
tga
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