Ochrobactrum sp. MT180101: HGK82_04800
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Entry
HGK82_04800 CDS
T07147
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocr01002
]
HGK82_04800
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ocr01011
]
HGK82_04800
Peptidases and inhibitors [BR:
ocr01002
]
Cysteine peptidases
Family C82
HGK82_04800
Peptidoglycan biosynthesis and degradation proteins [BR:
ocr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HGK82_04800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
DUF366
DUF6985
Motif
Other DBs
NCBI-ProteinID:
QOD64562
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All DBs
Position
1:1002558..1004564
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AA seq
668 aa
AA seq
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MQFSRHSQMDEKSSAARGQNIRRAAAIALAASVFLPTAQAQAANSLMELFQQRRQQQVQP
AQPVQPQVTPRAPVAPKAVSAPRAAVRSLPPVQRVTVKGPQIYDYKPDTLVNIDFSALDM
QVTAATEPVTVDPLTSGMSPIRPQIREETPGQRAFDAATNYLKSVNVKAEKEIAQAIVDY
YSSQRSFMWSADDKVLDRAKNVAAFFARADEDGLNPDEYAVTIPADNFDGAAESERQQKL
AEFEIRMSARALRYAIDAGEGRVIADRLSGFHDLPRNRVDPKAVLEKLASESDPAAYLHG
FQPSNEQYAALKRELANTEPPSAEPIRISLNGIIKPGDTNDQLSKVVALISRHAPAGYLA
QHKQVLDTHASGDVYDPELVSAIKDYQKLSGSTPDGVIGRNTLSALQGEQSSIKRDRILY
SMERLRWLPHDFGTRYVMVNQPAYRAEYFEDGKEKLAMNVVIGSPTHQTYFFYNKVQTVV
FNPSWGVPRSIILNEMLPKVMRDTSYLDRNGYEVYAGGKKVSASAVNWSAVAAGKAHVGI
RQKPSLDNALGELKILFPNAHDIYMHDTPAKSYFSRDMRALSHGCIRLERPRDMAAAVLG
TSVTDLEKYFGKNERGIKVKEPVPVFISYFTAWPEADGKIHYYGDVYDRDSGLQKAFDKT
AGSRLAAL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcagttttccagacactcgcagatggatgaaaagagcagcgccgcacgcggacaaaat
atccgccgcgcagccgcgatagctctggcagcttcggtgtttctccccacggcacaggct
caagccgcaaattcgttgatggaacttttccaacagcgtcgccagcagcaggtgcagcca
gcccagcctgttcagccgcaagtcactcctcgcgcacctgtagcaccgaaggccgtttct
gctcctcgtgccgctgtgcgcagccttccgccagtccagcgcgtgaccgtcaaagggccg
cagatttacgactacaagccggatactctggtcaatatcgatttcagcgcgctcgatatg
caggtaactgcagcaaccgaaccagtgaccgtcgatccgctgacatcgggcatgtcgccg
atccgtccgcagattcgcgaagaaacgccggggcagcgtgccttcgatgcagcgacgaat
tatctgaaatccgtgaatgtcaaagccgagaaagagatcgctcaggcgatcgtcgactat
tattcaagtcagcgctctttcatgtggtcggccgacgataaagtgctcgaccgcgccaag
aatgttgcggctttctttgcccgtgcggacgaagacgggctcaacccggatgaatatgca
gtcacgatcccggctgacaatttcgatggcgctgctgaatctgagcgccagcagaaactc
gcagaatttgaaattcgcatgtctgcccgcgcgctgcgctatgccatcgatgcgggtgag
ggacgtgtaatcgcagaccgcctcagtggtttccacgatctgccgcgcaaccgtgtcgat
ccgaaagccgttctcgaaaagctggcatcggaaagcgatccggctgcctatctgcatggt
ttccagccgagcaatgagcaatatgcggcgttgaagcgcgagcttgcgaataccgagccg
ccatctgccgagccaatccgcatctcgctgaatggcatcatcaagccgggcgataccaat
gatcagctcagcaaggtggttgcgctgatttcgagacatgcgcctgctggctatctggca
cagcacaagcaagtgctggacacgcatgcaagcggcgacgtctatgatccggaactggtt
tctgcaatcaaggattatcagaagctttcgggcagcacgccggacggcgtcatcggtcgc
aatacgctttccgcacttcaaggcgagcaatcttccatcaaacgcgaccgtatcctttat
tccatggagcgcctgcgctggctgccgcatgatttcggcacgcgttacgtgatggtcaat
cagccggcttaccgtgccgaatatttcgaggacggaaaagagaagctggccatgaatgtg
gttatcggctctccaacccatcagacctacttcttctacaacaaggtgcagacggtcgtt
ttcaatccgtcatggggcgtgccgcgctccatcatcctgaacgagatgctgcccaaggtc
atgcgtgatacgagctatctcgaccgcaatggttacgaggtctatgcaggcggcaagaag
gtttccgccagcgccgtcaactggagtgcagttgccgcgggcaaagcccatgtcggtatt
cgccagaagccgagcctcgacaatgcgctgggcgaactcaaaattctgttcccgaatgcg
catgatatctacatgcacgacactccggccaaatcctatttcagccgcgatatgcgtgcc
ctgagccatggctgcattcgtctggaacgcccacgtgacatggcggcggcggttctgggg
acatcggtgacggatctggaaaaatatttcggcaagaatgagcgtggcatcaaggtcaag
gaacctgtgcctgtcttcatttcctatttcaccgcatggccggaagcggatggaaaaatc
cattattacggcgatgtttacgaccgtgattccggattgcagaaagcattcgacaagacg
gcaggttcgcgcctcgcagcgctctga
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