Ochrobactrum sp. MT180101: HGK82_04935
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Entry
HGK82_04935 CDS
T07147
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HGK82_04935 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocr03400
]
HGK82_04935 (uvrA)
DNA repair and recombination proteins [BR:
ocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HGK82_04935 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HGK82_04935 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
DnaJ_CXXCXGXG
AAA_25
AAA_29
nSTAND1
AAA_21
RsgA_GTPase
AAA_33
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QOD64586
LinkDB
All DBs
Position
1:complement(1032948..1035872)
Genome browser
AA seq
974 aa
AA seq
DB search
MSDQKFISIRGAREHNLKNVDLDLPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGV
PYSPATGLPIESQTVSQMVDRVMALEEGTRLYILAPIVRGRKGEYKKELAELQKKGFQRV
KVDGTFYEIADVPALDKKYKHDIDVVVDRVVVRPDLSTRLADSLETCLKLAEGLAVAEFA
DKPLPPEETAEGGAANKSANETHERILFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPT
CDGLGTQQAIDPNLIVPDETAVLKDGAIAPWARSSSPYYNQTLEALGKAYGFKIGARWVD
LSEEAQQAILYGTKGKEITFQYDDGLRSYQTTKPFEGVIPNLERRWKETDSAWSREDIER
FMASTPCPSCNGYRLKPEALAVKVGMKHVGEITEMSIRKADAWFRDIDSSFNDKQREIAA
RILKEIRERLQFLNDVGLDYLTLARNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSI
GLHQRDNARLLDTLRHLRDLGNTVIVVEHDEDAILTADYVVDIGPAAGVHGGKIIAQGSP
QDVMSNANSLTGKYLSGAMEVAVPAERRKISKSKRIKVVGARGNNLKNVSADIPLGTFTA
VTGVSGGGKSTFLIETLFKAASRRIMGSREHPAEHDRIEGLEFLDKVIDIDQSPIGRTPR
SNPATYTGAFTPIRDWFAGLPEAKARGYQAGRFSFNVKGGRCEACQGDGVIKIEMHFLPD
VYVTCDVCHGKRYNRETLEVLFKGKSIADVLDMTVEEGAEFFSAVPAVRDKMETLVKVGL
GYIKVGQQATTLSGGEAQRVKLAKELSRRATGRTLYILDEPTTGLHFHDVAKLLEVLHEL
VEQGNTVVVIEHNLEVIKTADWVIDLGPEGGDGGGEIVAVGRPEDIVQEKRSYTGHFLKE
LLERRPKRSSEAAE
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcagaaattcatttccatacgtggcgcgcgcgaacacaatctgaaaaatgtc
gatctcgatctgcctcgcgacaagctgatcgtgatgacggggctttccggctcgggcaaa
tcctcgcttgccttcgacacgatctatgcggaaggccagcgccgttatgtcgaaagtctt
tcggcctatgcgcgccagttcctcgaaatgatgcagaagccggatgtcgaccagatcgac
ggcctatctcctgccatttccattgaacagaagacgacgagccgcaatccgcgttcgacg
gtcggcaccgtcaccgaaatctacgactatatgcgcctgctctttgcgcgcgtgggcgtg
ccctattcgcctgcaaccggccttcccattgagagccagaccgtcagccagatggttgat
cgggtcatggcgctggaagaaggcacgcgcctttatatcctcgcgcccatcgttcgtggc
cgcaagggcgagtacaagaaggagctggcagagcttcagaagaagggctttcagcgcgtc
aaggtggacggcaccttctatgaaatcgccgacgttccggcgctggacaagaagtacaag
cacgacatcgatgttgtggtggaccgcgttgtggtgcgccctgacctgtcaacccgcctc
gccgacagtcttgaaacctgcctcaagcttgccgaaggtctggccgtcgctgagtttgct
gacaagccgctgccgccggaagaaacggctgaaggtggtgctgcaaacaagtcggccaac
gaaacgcatgagcgcattctgttttcggaaaagtttgcctgcccggtttccggtttcacc
attccagaaatcgaaccgcgcctgttctcgttcaacaacccgttcggcgcctgcccgacc
tgtgatggtctcggcacgcagcaggccattgatccgaacctgatcgttcccgacgaaacg
gcagtgttgaaggacggcgcgattgccccatgggcgcggtcttcgtcgccctattacaat
cagacgctggaagcgcttggcaaagcctatggcttcaagatcggtgcgcgctgggttgat
ctttcggaagaagcccagcaggccattctctatggcaccaagggcaaggaaatcaccttc
cagtatgatgacggcctgcgttcctaccagacgacgaagccttttgagggcgtgatcccc
aatctggaacgccgctggaaggaaaccgattccgcctggtcgcgcgaagatattgagcgc
ttcatggcctcgactccctgcccttcctgtaacggctaccgcctgaagccggaagcgctt
gcggtcaaggtgggcatgaagcatgttggcgagatcacggaaatgtcgatccgcaaggcc
gacgcctggttccgcgacatcgatagcagctttaacgacaagcagcgcgagattgccgcc
cgcatcctcaaggaaatccgggagcgcctgcagttcctcaacgatgtcggcctcgactat
ctgacgctggcgcgcaattccggcacgctgtcgggcggtgaaagccagcgtatccgtctt
gcctcgcagatcggctctggcctgaccggcgtgctttacgtactggatgaaccatccatc
ggcctgcatcagcgtgataatgcgcgtctcctcgacacgctgcgccatctgcgcgatctc
ggcaacacggtcatcgtggtcgaacatgacgaagatgcgatcctgactgccgactatgtg
gtcgatatcggccctgcggcaggtgtccatggcggcaagatcatcgctcaagggtcgccg
caggacgtgatgtccaatgcgaactcgctgactggcaaatatctgtcaggcgcgatggaa
gttgccgttccggcggaacgccgcaagatttcaaagtccaagcgcatcaaggtcgtcggc
gcgcgcggcaacaatctgaaaaatgtctcggcggatattccgcttggaacctttaccgct
gtcaccggcgtttcaggcggcggcaagtccacctttctgattgaaaccctgttcaaggcc
gcttcgcgccgcatcatgggttcacgtgagcatccggctgagcatgaccgtattgaggga
ctggagttcctcgacaaggtgatcgatatcgaccagtcgccgattggtcgtacgcctcgt
tccaacccggcaacctatacgggtgccttcacgccgatccgcgactggtttgcggggctg
ccggaagccaaggcgcgcggttatcaggcgggccgcttctcgttcaatgtgaagggcgga
cgctgcgaggcttgccagggcgatggcgtcatcaagatcgagatgcacttcctgccggat
gtctatgtgacttgtgatgtctgtcacggcaaacgctataaccgcgaaacgctggaagtc
ctgttcaagggcaagtccatcgccgatgtgctggatatgacagtcgaggaaggcgcggag
tttttctcagccgtgcctgcggtgcgcgacaagatggaaacgctcgttaaggtgggtctc
ggctatatcaaggtcggccagcaggcgacgacgctttcgggtggtgaagcgcagcgcgtg
aaacttgccaaggaactgtcacgccgcgcaacgggccgcacgctctatattctggacgaa
ccgacaaccggcctgcacttccacgatgtggcgaagctgctcgaagtgctgcacgagttg
gtggaacagggcaacacagtcgttgtgatcgagcataatctcgaagtcatcaagactgcc
gactgggtgatcgaccttggaccggaaggtggcgatggcggcggcgagattgttgccgtg
ggccgtccggaagacatcgtgcaggagaaacgctcctacaccggccacttcctcaaggaa
ctgctggaacgccgccccaagcgcagttcagaggctgctgaataa
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