Ochrobactrum sp. MT180101: HGK82_05025
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Entry
HGK82_05025 CDS
T07147
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocr03032
]
HGK82_05025 (gyrA)
03400 DNA repair and recombination proteins [BR:
ocr03400
]
HGK82_05025 (gyrA)
Enzymes [BR:
ocr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HGK82_05025 (gyrA)
DNA replication proteins [BR:
ocr03032
]
Prokaryotic type
DNA Topoisomerases
HGK82_05025 (gyrA)
DNA repair and recombination proteins [BR:
ocr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HGK82_05025 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QOD64977
LinkDB
All DBs
Position
1:1050844..1053615
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AA seq
923 aa
AA seq
DB search
MNGGPNGGPSGIEPISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILHAMNEMN
LAYNRPYRKSAGVVGEVMGKYHPHGDASIYDALVRMAQDFSMRDPLVDGQGNFGSIDGDP
PAAMRYTECRLEKLTESILSDIDKDTVDFQDNYDGREQEPVVMPARFPNLLVNGSGGIAV
GMATNIPPHNLGEVIDGCVALIENPAIQLEEMIEIIPGPDFPTGGIILGRAGINSAYTTG
RGSVIMRGRATIEPMRGDREAIIITEIPYQVNKASMIEKMAELVRDKRIEGISDLRDESD
REGYRVVVELKRDAVADVVLNQLYRYTPLQTSFGCNMVALNGGKPEQLNLLDMLRAFVAF
REEVVTRRTKFLLNKARDRAHVLVGLAIAVANIDEVIALIRRAPDPTTAREQLMERRWPA
ADVAPLIRLIDDPRHRINEDDTYNLSEEQARAILDLRLQRLTALGRDEVADELNKIGEEI
RDYLDILSSRLRVMTIVKDEMIAVRDEFATPRRTEIGFGGAEMDDEDLIAREDMVVTVSH
AGYIKRVPLTTYRAQRRGGKGRSGMATKDEDFVTRLFVANTHTPVLFFSSRGIVYKEKVW
RLPVGTPQSRGKALINMLPLQQGERITTIMPLPEDEESWANLDVMFSTTRGTVRRNKLSD
FVQVNRNGKIAMKLEDEGDEILSVDTCTEFDDVLLTCAGGQCIRFPVTDVRVFAGRNSIG
VRGINLADGDKVISMAILHHVDADASTRSAYLKRSIAERRAQGADDADDIVVVGEEVGTD
AELTEELYQELKAREETVLTVSEYGYGKRSSSYEFRVSGRGGKGIRATDTSKTDEIGKLV
ALFPVEASDQILLVSDGGQLIRVPVDGIRIAGRSTKGVTIFNTADGEKVVSVERISEADS
DEENGSEGEAASEGEAPIADTEE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtggcccaaacggcggccctagcggtatcgaaccgatttccattatcgaggag
atgcagcgctcctatctcgattacgcgatgagcgttatcgtgagccgtgcgctgcccgat
gtgcgcgacggcctgaagcccgtacatcgccgcattctccacgccatgaacgagatgaac
ctcgcctataaccgcccgtaccgtaagtcggcgggtgtggtcggtgaggtcatgggtaag
tatcacccgcatggcgacgcttctatttatgacgctctcgtgcgtatggcgcaagatttc
tccatgcgcgatccgcttgtcgacgggcagggcaatttcggctccatcgacggcgatccg
ccggcagcgatgcgttacaccgaatgccgtctggaaaagcttaccgaatccatcctgtcg
gacatcgacaaggacacggtcgacttccaggacaattatgacggccgcgagcaggaacct
gtggttatgcctgcacgcttcccgaacctgctcgtcaacggttcgggcggtatcgctgtc
ggcatggcgaccaacattccgccacacaatctcggtgaagtcattgacggctgcgtagcg
ctcattgagaatccggctattcagctggaagaaatgattgagatcatccctggtccggat
ttcccgaccggtggcatcatcctcggacgcgcaggcatcaattccgcctacacgactggg
cgcggttcggtgatcatgcgcggacgcgccaccattgagccgatgcgcggtgaccgcgaa
gccattatcatcaccgagatcccgtatcaggtgaacaaggcttcgatgatcgagaaaatg
gccgaactggtgcgcgacaagcgcatcgaaggtatttccgatctgcgtgacgaatccgac
cgcgaaggctatcgcgttgtggtcgaactcaagcgcgacgccgttgccgatgtcgttctg
aaccagctctatcgttacacgccgctgcagacctcgttcggttgcaacatggtggcgctg
aacggcggcaagccggaacagctcaatctgctcgacatgctgcgcgcttttgttgccttc
cgcgaggaagtcgtgacgcgccgcacaaagttcttgctcaacaaggcgcgcgaccgcgcg
catgtgttggtcggccttgcaattgcggtcgccaatatcgatgaggtgattgcactcatc
cgtcgtgcgcccgatccaacgacggcccgcgagcagttgatggaacgtcgttggcctgca
gccgatgtggctccgctgatccgtctcatcgacgatccgcgccatcgtatcaatgaagac
gacacctataacctctccgaagaacaggctcgtgccattctcgatctgcgtctgcagcgc
ctgaccgcgctcggtcgcgacgaagtggcggacgaactgaacaagatcggtgaggaaatc
cgcgattatctcgacattctctcgtcgcgcctacgcgtgatgacgatcgtcaaggatgag
atgattgcggttcgtgacgagttcgccacgccacgccgcaccgaaatcggtttcggtggc
gccgaaatggatgacgaagacctgatcgcccgtgaggatatggtcgtcaccgtcagtcat
gcaggctatatcaagcgcgttccgctgacgacctatcgtgcgcagcgccgtggcggcaag
ggccgctccggcatggccacgaaggacgaggatttcgtcacccgcctgttcgtcgccaat
acgcatacgccggttctgttcttctcctcgcgtggcattgtctacaaggagaaggtctgg
cgtctgcccgtcggcacgccgcagtcccgtggcaaggcgctcatcaacatgctgccgttg
cagcagggcgagcgcatcaccacaatcatgccgttgccggaggatgaagaatcctgggca
aatctcgacgtcatgttctcgaccacgcgcggtacggttcgccgtaacaagttgtccgac
ttcgttcaggtcaaccgcaacggcaagatcgcgatgaagttggaagacgagggcgatgaa
atcctctccgtcgatacctgtacggaattcgacgatgtgcttctgacctgtgccggtggc
cagtgcattcgattcccggttaccgatgtgcgcgtcttcgcaggccgcaactcgatcggt
gtgcgcggcatcaatctggccgatggcgacaaggtcatctccatggcgatcctgcatcac
gtcgatgccgatgcatcaacccgttctgcctatctcaagcgttcgattgccgagcgccgg
gcgcagggtgcggacgacgcagacgacatcgtggtcgtcggcgaggaagtcggaaccgat
gcggaactgaccgaagagctctatcaggagctgaaggcccgcgaagaaaccgtgctgact
gtcagcgaatacggttacggcaaacgttcctcgtcctacgagttccgcgtttcaggccgt
ggcggcaagggcatccgcgctaccgacacgtcgaagaccgacgaaatcggcaagcttgtt
gccctgttcccggtcgaggcgagcgatcagattctgcttgtttccgatggcggacagctc
attcgcgtaccggttgacggtatccgtattgccggacgttccaccaagggcgtcacgatc
ttcaacacggcggatggcgaaaaggttgtctcggtcgaacgcatatccgaagcggatagc
gacgaagaaaacggcagtgagggcgaggcagcttctgaaggcgaagcaccaatcgcggac
accgaagaataa
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