Ochrobactrum sp. MT180101: HGK82_06485
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Entry
HGK82_06485 CDS
T07147
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocr03036
]
HGK82_06485
Chromosome and associated proteins [BR:
ocr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
HGK82_06485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
QOD64869
LinkDB
All DBs
Position
1:1354527..1358852
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AA seq
1441 aa
AA seq
DB search
MLHAPIPAAEAASLPLGSSTPPAASILAAAERILSHLEQGRTVDAAMLRSAMEDAFGASD
TAGAWDWKAAYDACEVATVLFLRKYGKPLFRKAASPASRLTALTKIIGLLPTHTRRSEET
QAFQQFSTPVPLGLAALTAATLTPTDRVLEPSAGTGLLGVLAETAGASLILNELADTRAD
LLTSLFPAVPVTRFDAAQIDDHLDPTAMPSVVIMNPPFSVMANVTGRVADAAYRHIASAL
ARLADGGRLVAITGANFSPELPAWRDAFVRLQARGRVVFTAAIAGSVYAKHGTTIDTRLT
VIDKAPAEDAEHLPDSAGIAPDVATLLAWIDAQLPARLPVTIARPNAMSAATPRTVRGYL
ARAATAQPDRRITQIEGVPLAYETIDWTPPESGRLSDSIYEAYVLQSIRIDGAQPHPTKL
VQSAAMASVAPPKPSYRPTLPGAIVADGVLSDAQLETVIYAGEAHGEYLAGAWTVDETGD
LVTAAPDDAPNAVRFRRGFMLGDGTGAGKGRQSAGIILDNWLQGRRKAVWISKSDKLLED
AQRDWSALGMERLLVTPLSRYPQGTAIRLPEGVLFTTYATLRSDDRGEKLSRVKQIVEWL
GSDFDGVIIFDESHAMQNAGGGKGERGDVAPSQQGRAGLRLQHMLPNARIVYVSATGATT
VHNLTYAQRLGLWGGEDFPFANRAEFVEAVDNGGVAAMEVLARDLRALGLYTARSLSYDG
VEYELVEHQLTPEQTRIYDTYAGAFAIIHNHLDAAMQAANITGDSGTLNRQAKSAARSAF
ESAKQRFFGHLLTSMKTPTLVRSIEQDLAAGHSAVIQIVSTGEALMERRLAEIPTEEWHD
VRVDITPREYVLDYLAHSFPVQLYEPFSDSEGNLSSRPVYRDGQPVESREAVARRDELIE
RLASLPPVPGALDQIVQRFGTDIVAEVTGRSRRVVRKGERLAVENRAGSANLAEAASFMD
DDKRVLVFSDAGGTGRSYHADLAVRNQRLRIHYLLEPGWKADAAIQGLGRTNRTNQAQPP
LFRPIATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESHYARDALRQL
YLLLVRGKVEGCSLDRFETATGLKLMDDNGIKDELPPITTFLNRLLALTIELQGVLFTAF
EQLLMAKIEGAIRSGHYDVGLETLQAESFVVTDSKVIHVHPGTGAETRLLTITRRERNRP
ITLLDALDHRADPRAQLLVNGRSGRAAVQMPAPSMMLDDGEIERRVCLIRPMEQHYAPLR
MMEESHWEEAERDRFAAAWDAELADIPEFSDSTIHIVAGLLLPIWKRLPDESTRVYRLQT
DAGERIIGRRVSPAWAANAASQGASTLTPEHAFAALMEGRTILDLAEGLQLRRARVMSAY
RLELTGFTEAMRERLRAYGLFSEIISWKLHFFVPADTNGVSILTKLLDTYPVARISEREA
A
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgctccatgctccgatccccgccgccgaggcggcatcgcttccgcttggctcctccacg
ccgccggccgcctccatcctcgccgccgccgaacgcatcctctcccacctcgaacagggc
cgcaccgtcgatgccgccatgctgcgcagcgcgatggaggacgccttcggcgcgtccgac
acagccggcgcgtgggactggaaagccgcctatgacgcttgcgaggtcgcgaccgtcctg
ttcctgcgcaaatacggaaagccgcttttccgcaaagccgcatcgccggcttcacggctc
acggcgctgaccaagatcattggtctgctgccgacgcacacgcgtcgatccgaagagacg
caggccttccagcagttctccacgccggtcccgctcggccttgccgcgttgacagcggca
acgttgaccccgaccgaccgcgtgctggagccgtccgccggcaccggcctgcttggcgtc
cttgccgaaactgcgggcgcatcgctcatcctcaacgagctggccgatacccgcgccgat
cttctcacttctctcttcccggccgtgcccgtcacgcgcttcgacgccgcccagatcgac
gaccatctcgatccgaccgctatgccgagcgtcgtcatcatgaacccgccattctcggtt
atggcgaacgtcaccgggcgcgtcgccgacgccgcctatcggcatatcgcctcggcactg
gcccgtctggccgacggcgggcgcttggtcgccatcactggcgcgaacttctcgccggag
cttccagcctggcgggacgccttcgtccgtctgcaggcgcgcggccgcgtcgtgttcacc
gccgcgatcgccggctcggtctatgccaagcacggcacgaccatcgacacccgcctgacc
gtcatcgacaaggcgccggccgaggatgccgagcatttgccggactccgccgggatcgcg
cccgacgtcgcgacgctgctcgcctggatcgatgcgcagctcccagcgcgcctgccggtc
acgatcgcgcgtccaaacgcgatgtcggccgccacgccgcgaacggtgcgaggttatctc
gctcgcgcggcgacggcccagcccgaccgccggatcacccagatcgaaggcgtgccgctc
gcctatgagaccatcgattggacgccgccggagagcggccgcctatcggactcgatctat
gaggcctacgtcctccagtcgatccgcatcgacggcgcgcagccgcacccgaccaagctg
gtgcagtccgcagccatggcctcggtcgcgccgccgaagccgagctatcgcccgaccctg
ccgggagcgatcgtcgccgacggcgtcctctcggacgcccagctcgagacggtgatctat
gccggcgaggctcatggcgaatatctcgcaggggcctggaccgtcgacgagaccggcgat
ctcgtcaccgccgcgccggacgatgccccgaacgcggtccgttttcgccgaggcttcatg
ctcggcgacggcacaggcgccggcaagggtcgccagtcggccggcatcatcctcgacaac
tggctgcaggggcgccgcaaggccgtctggatctccaaatccgacaagctgctcgaggac
gcacaacgcgactggtcggcgctcggcatggagcggctgctggtcacgccgctctcgcgc
tacccgcagggcacggcgatccggctccccgagggcgtcctattcaccacctacgccacg
ctacggtccgacgaccgtggagagaagctttcgcgcgtcaagcagatcgtcgaatggttg
ggctccgatttcgacggagtgatcattttcgacgagtcccatgcaatgcagaatgccggc
ggcggcaaaggagaacggggcgatgtcgcaccctcgcagcaaggccgtgcggggctccgg
ctccagcacatgctcccgaacgcccgcatcgtctatgtttctgcgaccggcgccaccacg
gttcataacctcacctatgcccagcggctcggcctgtggggcggcgaggatttccccttc
gccaaccgtgccgaattcgtcgaggccgtcgacaatggcggcgtcgccgccatggaggtg
ctcgcccgcgacctgcgcgcgctcggcctctacacagcgcgatcgctctcctatgacggc
gtcgaatacgaactggtcgagcaccagctcacccccgaacagacccgcatctatgacacc
tatgccggcgccttcgccatcatccataatcatctcgacgcggcgatgcaggccgccaac
atcaccggcgacagcggcacgctgaaccgacaggcgaagtctgccgcgcgctcggccttc
gagagcgccaagcagcgctttttcgggcatctcctgaccagcatgaagacgccgacgctg
gtccgctcgatcgagcaggacctggcggctggccattccgccgtcatccagatcgtttcg
accggcgaagccctgatggagcgtcgcctggctgaaataccgaccgaggaatggcacgac
gtccgcgtcgacatcacgccgcgcgaatacgttctggactacctcgcccattccttcccg
gtgcagctttatgaaccgttctcggacagcgagggcaatctgtcgtcgcggccggtctat
cgcgacggccaacccgtcgaaagccgcgaggccgtcgcccgccgcgacgagctgatcgaa
cggctcgcatcgctgccgccggtcccgggcgcgctcgaccagatcgtccagcgcttcggc
acggacatcgtcgccgaagtgacgggccggtcgcgccgcgtcgtgcgcaagggcgagcgg
cttgctgtcgagaaccgggcgggatcggccaatctcgccgaagcagcctcattcatggac
gatgacaagcgcgtcctcgtcttctccgacgccggcggcactggccgcagctatcatgcg
gatctcgctgtccgcaaccagcgcctgcgcatccactatctcctggagccgggctggaag
gccgacgcggcgatccaggggctcggccgcaccaaccgcaccaaccaggcgcagccaccg
ctcttccggccgatcgccaccgacgtgaaggccgagaagcgcttcctctcgaccatcgcg
cgacggctcgacacgctcggcgccattacgcgcggccagcgccagaccggcggccagggc
ctgttccgacccgaggacaatctcgaatcccactacgcgcgcgatgcgctgcgccagctt
tacctgctgctcgtgcgcggcaaggtcgagggatgctcgctcgatcgcttcgaaaccgcc
accggcctcaagctgatggacgacaacggcattaaggacgagctgccgccgatcaccact
ttcctcaaccggctgctggcgctcaccatcgagttgcagggcgtcctgttcaccgccttt
gagcaactcctgatggcgaagatcgagggcgcgatccgcagcggccactatgacgtcggg
cttgagacgctgcaggccgagagcttcgtggtcaccgacagtaaggtgatccatgtgcat
cccggcaccggcgcggagactcggctgctgaccatcacgcgccgggagcgcaatcgaccg
atcacgctgctcgatgcgctcgatcatcgcgccgatccgcgtgcgcagctgctcgtcaat
ggtcgctccggtcgcgccgcggtgcagatgccggccccgtcgatgatgctcgatgacggc
gagatcgaacgccgcgtgtgtctgatccggccgatggagcagcactatgcgccgctgcgc
atgatggaagagagccattgggaggaagccgaacgcgaccgcttcgccgccgcatgggac
gccgagcttgccgacatcccggaattctccgacagcacgatccacatcgtcgcgggcttg
ctgctgccgatctggaagcgcctgccggacgagtcgacgcgggtgtatcgactccagacc
gacgcgggcgagcgcatcattggccgccgcgtgtcgccggcctgggccgccaacgctgcc
tcgcagggggcgagcacgctgacaccggaacacgccttcgccgcgctgatggaaggccgc
acgatcctcgacttggccgaaggcctccagcttcgccgcgcccgtgtcatgagcgcctat
cgcctggagctgaccggcttcaccgaggcgatgcgcgagcgactgcgagcctatggcctg
ttcagcgagatcatctcctggaagctgcactttttcgtgccagccgacaccaatggcgta
agcatcctcaccaagctgctcgacacctatccggtggcgcgcatctccgagcgggaggcc
gcgtga
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