Ochrobactrum sp. MT180101: HGK82_07120
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Entry
HGK82_07120 CDS
T07147
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr02024
Quorum sensing
ocr03060
Protein export
ocr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HGK82_07120 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HGK82_07120 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HGK82_07120 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ocr02044
]
HGK82_07120 (secD)
Secretion system [BR:
ocr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HGK82_07120 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
ACR_tran
Sec_GG
MMPL
AMIN
SecD-TM1
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
QOD62597
LinkDB
All DBs
Position
1:1473429..1475963
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AA seq
844 aa
AA seq
DB search
MRTSKWVVVLYSLIVAIGVIIALPNFFTQKQLEAMPSWFPKRQVTLGLDLRGGSYLVLEV
DAASLKKDRLRSLLDDARSKLRAERIQPQSIRAVGDAVVVTIPDADQRSKAETALRTLIS
QVNTSGFGTAINDIDVASNDNQVRLTLTEAGFNYRLDAALQQSLEIIRQRVDQVGVAEPS
IQRVGSDRIVVQLPGLQDPAQLRQLLGSTAKMSFHMVADANPNDAPPPGVTIMPDSKDPN
IKYPIEDQIALSGERLTDARAGFDQRTNEPIVSFRFDSLGARQFADITTKNVNRPFAIVL
DGKVLSAPVIREPITGGSGQISGSFTVQDTVVLSALLRAGALPAPLTVIEERTVGPDLGG
DAIKMGLITGIVGFVLVAVFIQLLYGVWGTIANVALLLHTLLTFSALSLIGATLTLPGIA
GIILGIGIAVDANILINERIREETRRGLGAMAALDKGFHSAFSTIVDANVTSLISTLLLF
TFGTGPVRGFAITMMLGIAISMFTDVTLVRMVMAWYVRKRKLKVLVIEPFLKFVPEKTNI
SFMNARFIGIGVSIVLSILSIGLFFKPGLNYGIDFKGGIQAEIVTSQPADLAQLRAKLGA
LGLGEVALQSAGSPNDVLIRVQRQEGGEEAQTVAVNKMREAVTELDPGVKIERTEVVGPK
VSGELARSGFIAVILSALGMLIYLWWRFEWFFAMGAIITLILDTTKMVGFFALFQLDFNL
TAIAALLTAIGYSVNDKVVVYDRMRENMRLYKSKPLREIVDMSINQVLVRCVYTSMTTFL
CMLPMAIWGGSAVHNFAVPMLFGIFIATSSSIFIAAPILLLLGNWWQHRKEAHQAIEDSA
AAQK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacttccaaatgggtggttgtgctttatagcctgatcgttgcgatcggcgttatc
attgccttgcccaactttttcacccaaaagcaacttgaggcgatgccgtcctggttcccg
aagcgtcaggtcacgctcggcctcgacttgcgcggcggctcgtatctcgtgctcgaagtc
gatgcagcgagcctgaagaaagaccgtttgcgctctctgcttgacgatgcccgcagcaag
ctgcgtgccgaacgcatccagccgcagtcgatccgtgctgtcggagatgcggtcgtcgtg
accatccctgatgcggaccagcgttccaaggcggaaactgcacttcgcaccttgatttcg
caggtcaataccagcggtttcggcacggcgatcaacgacatagatgttgcctcgaacgac
aatcaggtacgcctgaccctcaccgaagcaggtttcaactatcgtcttgatgccgctctt
cagcagagccttgaaatcatccgtcagcgcgtcgaccaggtcggcgttgcagaaccgtcc
atccagcgcgtaggctcggaccgtatcgtcgttcagcttcccggtcttcaagacccggcg
cagcttcgccagcttctcggaagcacggcgaaaatgagcttccatatggtcgccgatgcc
aatccgaacgatgcgccgcctccgggcgtgaccatcatgccggattccaaggatccgaac
atcaagtacccgatcgaggatcagatcgccctttccggcgagcgtctcaccgacgcgcgt
gcaggtttcgaccagcgcaccaacgagccgatcgtgtctttccgtttcgatagcctcggt
gcacgccagttcgcggacattacgacgaaaaacgtcaatcgtccgttcgcaatcgtgctc
gatggcaaggtgctaagcgccccggtcatccgtgaaccgatcaccggcggctcgggccag
atttccggcagctttacggttcaggacacagttgttctttcggcactcctgcgcgctggc
gccctgcccgctccgctgaccgttatcgaagaacgcacagtcggtccggaccttggcggc
gatgccatcaagatgggtctgattacaggtatcgtgggcttcgtactcgtcgcggtcttc
atccagctcctttatggcgtctggggcacgattgccaacgtggcgctgttgctccacacc
ttgctcaccttctctgccttgagcctcattggcgcaacgctgacattgcccggtatcgcc
ggtattattctcggtattggtatcgcggttgacgccaatattctcatcaatgaacgtatc
cgcgaagaaacgcgacgcggcctcggagccatggccgcgctggacaagggcttccatagc
gccttctccaccattgtggatgcgaatgttacatccctgatctcgaccttgctgttgttc
accttcggcacaggcccggttcgcggctttgcgatcaccatgatgctcggtatcgcgatc
tccatgttcactgatgtgacgttggtacgcatggtcatggcgtggtacgttcgcaagcgt
aagctgaaggtgctcgtcatcgagccgttcctgaaattcgttcctgagaagacgaatatc
agcttcatgaatgcgcgcttcatcggcattggcgtctcgattgtgctgtctattctgtcc
attggtctgttcttcaaaccgggactgaattacggcattgacttcaagggcggcattcag
gcggaaatcgtcacgtcacagccagccgatctggcgcaacttcgcgccaagctaggcgca
ctgggtcttggcgaagtagcgcttcagtcagccggtagcccgaatgatgtcctgatccgc
gtccagcgtcaggaaggtggtgaggaagcgcagacagttgctgtcaacaagatgcgcgaa
gccgtgaccgagcttgatccaggtgtgaaaatcgagcggacagaagtcgtcggcccgaaa
gtctccggtgaactggcccgttcaggcttcatcgccgtcatcctgtcggcactcggcatg
ctcatctatctctggtggcgcttcgagtggttctttgcgatgggcgcaatcatcacgctt
atcctcgacaccacgaagatggtcggcttcttcgcgctgttccagctcgattttaacctg
acagccattgcagcgcttctgaccgctatcggttactcggtaaacgataaggtcgtggtt
tatgaccgcatgcgtgaaaacatgcgtctttataaatcaaagccgctacgcgagattgtc
gatatgagtatcaatcaggtgctcgtccgctgtgtttacacatcgatgacgacgttcctg
tgtatgctcccgatggcaatctggggcggtagcgcggttcataattttgccgtgccgatg
ctgttcggtatctttatcgctacatcgtcgtcgatcttcatcgccgctccgatcctgctt
ctgctcggcaactggtggcaacaccgcaaggaagcccatcaggcaattgaagacagcgcc
gcagcgcagaaatag
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