Ochrobactrum sp. MT180101: HGK82_08705
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Entry
HGK82_08705 CDS
T07147
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HGK82_08705
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
HHH_6
HHH
RNase_II_C_S1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QOD62886
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Position
1:1811573..1813876
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AA seq
767 aa
AA seq
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MADITKRIAGIIAAEINAKPDQALAAIGLLDEGSTVPFVARYRKEVTGGLDDTQLRQLSE
RLAYLRELEARRSSILESIRGQEKLTPELELKIAGVQTKAELEDLYLPYKPKRRTKAEIA
RERGLGPLAEAILSDRRLVPTEIAAQYVTGEVADVKAALDGARDIIAEGFAENAELIGNL
RNYLKERAVLRSRVVDGKQDAGAKFSDYFDHFERWANVAGHRALAMLRGRNEDFLSLDIE
IDADDTSPVKPVERKIAAAYNIGATLPGDRWLMEVAGWAWRVKLSLSLSLDLMRDLRERA
EEEAINVFARNLKDLLLAAPAGSRATMGLDPGIRTGVKVAIVDGTGKLLDTTTVYPFPPK
NDVRGTQAELASLIRKHKIELIAIGNGTGSRETERLVVDMLNDLPAPKPLKVIVSEAGAS
VYSASEAAAAEFPQLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQSRLAR
SLDAVVEDAVNAVGVDLNTASASLLARVSGLGKSLAEAIVAHRDDAGAFKNRKELLKVAR
LGNRAFEQCAGFLRIANGTEPLDASSVHPEAYGVAKKIVSACGRDVRSLMGDSAALKALD
PRVFVDERFGLPTVRDIIAELDKPGRDPRPEFKTATFADGIDDIKDLKPGMMLEGTVTNV
AAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVTEVDVPRKRIGLTMRK
DGGEAPAPRGPANRDQRPAKNFTPQRKQEQPSTGGFGAALLEAMKKK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggacattaccaagcgcattgccgggatcatcgcggcggaaatcaacgcaaagccg
gatcaggcactggcggccatcggcctgctggacgaaggctcaaccgtgcctttcgtcgcc
cgttaccgcaaggaagtcaccggcggccttgatgatacgcagctgcgacagctttcagag
cgcctcgcttacttgcgcgaacttgaggcgcggcgttcgtccattctggaatcgatccgc
gggcaggaaaagctaacgccggaactcgaactgaaaatcgcaggcgtccagaccaaggcc
gagcttgaagacctgtatcttccctataagcccaagcgccgcaccaaagcagaaatcgca
cgcgaacgtggtcttggcccgcttgccgaagctattctgagcgaccgcaggctggtccct
accgagattgctgcgcaatatgtcaccggtgaagttgccgatgtgaaggctgcactggat
ggtgcgcgcgacatcatcgccgaaggctttgcggaaaatgccgaactgatcggcaatttg
cgcaactatctcaaggaacgtgctgttctgcgctcacgtgtggtcgatggcaaacaggat
gcaggcgcaaaattctcggattatttcgaccatttcgagcgctgggcaaatgttgcaggc
caccgggctctggccatgctgcgcggacgcaacgaggatttcctgtcgctcgacattgaa
atcgacgccgacgacacctcgccggtaaagcctgtcgaacgcaaaatcgcagccgcttac
aatatcggcgcaaccctgcccggcgaccgctggctgatggaagttgcaggctgggcatgg
cgcgtcaaactctcgctctccctgtcgctcgacctgatgcgcgacctgcgtgaacgcgcc
gaggaagaagccatcaacgtcttcgcccgcaacctcaaagacctgctgttggccgcgcct
gccggttcgcgtgccaccatgggtcttgatccgggcatccgcaccggcgtcaaggtcgca
atcgtcgatggcactggcaaactgctcgacacaacgacggtctatccgtttccgccaaag
aacgatgtgcgtggcacacaggccgaactcgcaagcctgatccgcaaacacaagatcgag
ctgattgccatcggcaacggcacaggcagccgcgaaaccgaacgtcttgtcgtggatatg
ctcaacgacttgccagcgccaaagccgctcaaagtcatcgtgtcggaagcaggcgcatca
gtctattcggcatcagaagccgcagcggccgaattcccgcagctcgacgtatcgctgcgc
ggtgccgtttccatcgcccgccgcctgcaggatcctctggcagagctcgtcaagatcgag
ccgaaatccatcggcgtcggccagtatcagcatgatgtcgatcagtcccgtctggcgcgt
tcgctcgacgcagtggtcgaagatgcagtgaacgctgtcggcgttgatctcaacacggca
tccgcctcactgctggcgcgtgtgtccggtctcggaaagtcgctcgccgaagcaatcgtt
gcgcatcgcgatgacgccggtgccttcaagaaccgcaaggaacttctgaaagtcgcccgc
ctaggcaaccgcgcttttgaacaatgcgcaggcttcctgcgtatcgccaacggcaccgag
ccgcttgatgcatcctccgttcacccggaagcctatggcgttgccaaaaagatcgtttcc
gcctgcggccgcgatgtgcgcagcctcatgggtgatagcgcagcactcaaggcgctcgat
ccgcgtgtctttgtcgatgagcgttttggtctgccaaccgtgcgcgacattatcgctgag
cttgataagccgggccgcgatccccgccctgaattcaagaccgcgacctttgccgatggc
atcgatgacatcaaggacctgaaacccggcatgatgcttgaaggcaccgtcacaaacgtt
gcggcctttggtgccttcgtcgatatcggtgtgcatcaggacggacttgtccatgtttcg
cagctcgccgaccgcttcgtcaaagacccgcatgaagtggtcaaggctggcgatgtggtg
aaggtgcgcgtgacggaagtggatgtgccacgcaagcgcatcggcctgacgatgagaaag
gacggcggtgaagcccctgccccacgtggtcctgcaaaccgcgaccagcggcctgccaaa
aacttcactccacagcgcaaacaggaacagccatcaaccggcggtttcggtgcagcactt
ttggaagcgatgaagaagaaataa
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