Ochrobactrum sp. MT180101: HGK82_09285
Help
Entry
HGK82_09285 CDS
T07147
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr00300
Lysine biosynthesis
ocr01100
Metabolic pathways
ocr01120
Microbial metabolism in diverse environments
ocr01230
Biosynthesis of amino acids
Module
ocr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HGK82_09285 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocr01002
]
HGK82_09285 (dapE)
Enzymes [BR:
ocr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HGK82_09285 (dapE)
Peptidases and inhibitors [BR:
ocr01002
]
Metallo peptidases
Family M20
HGK82_09285 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QOD62997
LinkDB
All DBs
Position
1:1940385..1941572
Genome browser
AA seq
395 aa
AA seq
DB search
MSLAVNPADNLAALIRCASVTPAEGGALTALEAMLKPMGFSVERPVFHDEDTPDIENLYA
RKSGNGLHLMFAGHTDVVPPGNEGDWKHPPFSAAIEDGVMYGRGAVDMKGGVACFVAAVA
RHIEKHGSIKGSVSFLITGDEEGPAINGTVKLLDWAKQRGESWDASIVGEPSNPNALGDA
IKIGRRGSLSGTITVHGVQGHAAYPHLAENPVRGITTLVDSLLYPAFDQGTANFQASNLE
VTSIDVGNKATNVIANKATASFNIRFNDTWTAETLQAEIIARLEKAARDNRLRPGRETPI
KYELTWREHPSHVFLTRDEKLIGTLTDSVEAVTGKRPELSTSGGTSDARFIKDYCPVVEF
GLVGQTMHMVDERVALADLEGLTQIYERFIADFFG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcttagccgtcaatcccgccgataaccttgccgccctcatccgctgtgcatccgta
acgcctgccgagggcggtgcgctgacggcgctggaagcgatgttgaagccgatggggttt
tcggtggaacgacctgtcttccacgatgaagacacgcccgacatcgaaaacctttatgca
cgcaagtcgggcaatggcctgcatctgatgtttgcgggacataccgatgtcgtgcctccc
ggcaatgagggcgactggaaacacccgcccttttctgccgctatcgaagacggcgtgatg
tacggtcgcggtgcggttgacatgaagggcggtgtggcttgcttcgtggccgcagttgcc
cgtcacatcgaaaagcacggcagcatcaagggcagcgtttccttcctcatcaccggcgac
gaggaaggcccggccatcaatggcacggtcaagcttctcgactgggcgaagcagcgcggc
gaaagctgggatgcatccatcgtcggagagccaagcaatccgaatgcgctcggcgatgcg
atcaagatcggacggcgcggctcgctgtccggcacgatcaccgtccatggcgtgcagggc
catgccgcctatccgcatctggccgaaaacccggtacgcggcattaccacgctggtcgac
agcctgctttatccggctttcgaccaagggacagccaattttcaggccagcaatctggaa
gtaaccagcatcgacgtcggcaacaaggccaccaatgtcattgcgaacaaggcaacggcc
tcgttcaacatccgcttcaacgacacctggacggcagagaccttgcaggccgaaatcatc
gcgcgcctcgaaaaagccgcccgcgacaatcgcttgcggccgggtcgcgaaacaccgatc
aaatacgaactcacctggcgcgagcatccgagccatgtgttcctgacccgtgacgaaaag
ctgatcggcacgttgacggattccgtcgaggccgtaacgggcaaacgcccggaactgtcg
acatcgggcggcacgtccgatgcccgtttcatcaaggattattgtccggtggtcgagttc
ggccttgtcggacagaccatgcatatggttgacgagcgcgtggcccttgccgacctcgaa
ggcctgacacagatttatgaacgcttcatcgccgatttctttgggtaa
DBGET
integrated database retrieval system
