Ochrobactrum sp. MT180101: HGK82_11420
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Entry
HGK82_11420 CDS
T07147
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr00020
Citrate cycle (TCA cycle)
ocr00640
Propanoate metabolism
ocr00660
C5-Branched dibasic acid metabolism
ocr00720
Other carbon fixation pathways
ocr01100
Metabolic pathways
ocr01110
Biosynthesis of secondary metabolites
ocr01120
Microbial metabolism in diverse environments
ocr01200
Carbon metabolism
Module
ocr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ocr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HGK82_11420 (sucD)
00640 Propanoate metabolism
HGK82_11420 (sucD)
00660 C5-Branched dibasic acid metabolism
HGK82_11420 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
HGK82_11420 (sucD)
Enzymes [BR:
ocr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HGK82_11420 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
DapB_N
Motif
Other DBs
NCBI-ProteinID:
QOD63376
LinkDB
All DBs
Position
1:complement(2382283..2383185)
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AA seq
300 aa
AA seq
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MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWEGQKGEKLPIF
ATVAEAKERTGADASVIYVPPAGAADAIIEAIEAEIPFIVCITEGIPVMDMVRVKERLER
SKSRLLGPNCPGILTPEECKIGIMPGNIFKKGSVGVVSRSGTLTYEAVFQTSNEGLGQTT
AVGIGGDPVKGTEFIDVLEMFLADDETKSIVMIGEIGGSAEEDAAQFLKDEAKRGRKKPM
VGFIAGRTAPAGRTMGHAGAVISGGKGGAEDKIAAMESAGIRVSPSPAQLGKTLVEVLKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctcgtcaacaaggacaccaaggttctcgtacagggcctgaccggcaagacc
ggcaccttccacaccgaacaggcgcttgcctactacggcacgcagatggtcggcggtatc
catccgaagaagggtggcgaaacctgggaaggtcagaagggcgaaaagcttccgatcttc
gcaaccgttgccgaagccaaggaacgcacaggtgcagacgcatcggtgatctacgttccg
ccagcaggtgctgccgatgcgatcatcgaagccatcgaagctgaaatcccgttcatcgtc
tgcatcaccgaaggtattccggtcatggacatggttcgcgtcaaggagcgtctggaacgc
tcgaagtcgcgcctgctcggaccaaactgcccaggcatcctgacccctgaagaatgcaag
atcggcatcatgccgggcaatatcttcaagaagggttcggtgggtgttgtttcccgttcc
ggcacgcttacctatgaagcagtgttccagacctcgaacgaaggcctcggccagaccact
gctgtcggtatcggcggtgatccggtcaagggcaccgagttcatcgacgtgctggaaatg
ttcctggccgacgacgaaaccaagtcgatcgtcatgatcggtgaaatcggcggttcggct
gaagaagatgcggcccagttcctcaaggacgaagccaagcgcggtcgcaagaagccgatg
gtcggcttcatcgctggccgtacggctcctgccggacgcaccatgggccatgctggcgcc
gtgatctccggcggcaagggcggcgcggaagacaagattgctgccatggaatcggctggc
attcgcgtgtcgccgtcgccggcgcagctcggcaagacgctggtcgaagtcctcaagggc
tga
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