Ochrobactrum sp. MT180101: HGK82_11745
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Entry
HGK82_11745 CDS
T07147
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr03030
DNA replication
ocr03430
Mismatch repair
ocr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HGK82_11745 (dnaQ)
03430 Mismatch repair
HGK82_11745 (dnaQ)
03440 Homologous recombination
HGK82_11745 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocr03032
]
HGK82_11745 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ocr03400
]
HGK82_11745 (dnaQ)
Enzymes [BR:
ocr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HGK82_11745 (dnaQ)
DNA replication proteins [BR:
ocr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HGK82_11745 (dnaQ)
DNA repair and recombination proteins [BR:
ocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HGK82_11745 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Abhydrolase_6
Motif
Other DBs
NCBI-ProteinID:
QOD63435
LinkDB
All DBs
Position
1:2454538..2455233
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AA seq
231 aa
AA seq
DB search
MREIVFDTETTGLERLEDRVIEIGGVELINKFPTGRTFHKYINPQGRQVHPEALAVHGIS
NEQLLDKPTFAEVLDEFLEFFDGAKLVAHNAMFDLGFINAELARLGQAEIQSERIIDTLA
LARRKHPMGPNSLDALCKRYGIENGHRTLHGALLDSEILAEVYIELIGGKQTALGLSMGG
AVSGNNAGESGAAIVLAARPRPLAPRISDAERAAHAALVDKLGEKAIWKKY
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcgttttcgatacggaaaccaccggtctggaaaggctcgaggaccgtgtg
atcgaaatcggcggcgtggaactgatcaacaagtttcccacaggccgcactttccataaa
tacatcaacccgcaggggcgtcaggttcatcccgaagcgctcgcggtccacggcatcagc
aatgaacaattgctggacaagccgacattcgcggaagttctggacgagtttctcgaattt
ttcgacggggccaagctcgtggcacacaatgccatgttcgaccttggcttcatcaatgct
gaactggcaaggctcggacaggctgaaatccagtcggagcgcatcatcgatacattggcg
cttgcccgccgcaagcatccgatgggtccgaattcactcgacgccttgtgcaagcgctac
ggcatcgagaatggacaccgtaccctgcacggggcattgctcgattccgagattttggcc
gaagtctatatagaactgatcggcggcaagcagacagcgcttgggctcagcatgggcggt
gctgtcagcggcaacaatgccggagagagcggcgctgccatcgttcttgccgcgcgcccg
aggccgcttgccccacgcatttccgatgcggagcgcgctgctcacgccgcacttgtggac
aagctgggcgaaaaagccatctggaagaaatactga
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