Ochrobactrum sp. MT180101: HGK82_12235
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Entry
HGK82_12235 CDS
T07147
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocr03021
]
HGK82_12235 (nusA)
03009 Ribosome biogenesis [BR:
ocr03009
]
HGK82_12235 (nusA)
Transcription machinery [BR:
ocr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HGK82_12235 (nusA)
Ribosome biogenesis [BR:
ocr03009
]
Prokaryotic type
rRNA transcription factors
HGK82_12235 (nusA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
Ribosomal_S17e
Motif
Other DBs
NCBI-ProteinID:
QOD63529
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Position
1:2554832..2556439
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AA seq
535 aa
AA seq
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MAVSANRLELLQIADAVAREKSIDREIVLAAMADAIQKAARSRYGQESNIRADINAKSGE
IKLQRLLEVVEHVEDYATQISLFTARDRNPDAQVGDFIADQLPPMDFGRIAAQSAKQVIV
QKVREAERDRQYDEYKDRVGEIVNGTVKRVEYGNVIVDLGRGEAIVRRDELIPREAFRYG
DRIRAYVYDVRREQRGPQIFLSRTHPSFMAKLFTMEVPEIYDGIIEIKSVARDPGSRAKI
AVVSRDASIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSPDAASFIVNALQPAEVAKV
VLDEDAERIEVVVPNDQLSLAIGRRGQNVRLASQLTGWDIDILTEDEESERRQKEFTERS
TLFMDALNVDEMVGQVLASEGFASVEELAYVEPGEIASIDGFDEDTAGEIQERAREYLDR
IESEQDDRRKELGVEDELRELPGITTAMLVAVGEDGVKTMEDFAGYAVDDLVGWRERKDG
ETVAHSGIFSSFDVSRVDAEQMVLTARLKAGWITEEELASAQEEEAEVGEEEAAS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagtgctaacaggctggagcttctgcagatcgccgatgcggtcgcacgcgag
aagtcgatcgaccgcgagatcgttcttgcggccatggccgatgcgatccagaaggcggcg
cgttcgcgttacggccaggaaagcaacatccgcgcggacatcaatgcgaagtccggcgag
atcaagctgcagcgtctgctcgaagtcgtcgagcatgtcgaggattacgcgacgcagatt
tcgctcttcaccgcgcgcgatcgcaacccggacgcacaggtcggcgacttcatcgccgat
cagctgccgccgatggatttcggccgtattgctgcccagtcggcaaagcaggtcatcgtg
cagaaagtgcgcgaagccgagcgtgaccgccagtatgacgaatacaaggatcgcgttggt
gagatcgtcaacggcaccgtcaagcgcgtcgaatatggcaatgtgattgtcgatctcggt
cgtggcgaagccatcgtgcgccgcgatgagctgatcccgcgtgaagctttccgttatggt
gaccgcatccgcgcctatgtctacgacgtgcgccgcgaacagcgcggcccgcagattttc
ctgtcgcgtacccatccgtccttcatggcgaagctcttcaccatggaagtgccggaaatc
tatgacggcatcatcgaaatcaagtcggttgcccgcgatccgggttcccgcgccaagatt
gcggtcgtgtcgcgtgatgcgtccatcgatccggtcggcgcctgcgtcggtatgcgtggc
tcccgcgttcaggccgttgtgggcgaactgcagggtgaaaagatcgacatcattccgtgg
tcgccggacgctgcttccttcatcgtcaacgcgcttcagccagctgaagttgccaaggtt
gttctcgatgaagatgctgaacgtattgaagttgtcgttccgaatgaccaactatcactt
gcaatcggtcgtcgcggtcagaacgtgcgccttgcttcccagctcaccggctgggatatc
gacatcctgacggaagacgaagaatccgaacgtcgccagaaggaattcaccgagcgttcg
acgctcttcatggatgccctcaacgttgacgagatggttggtcaggttctggcctccgaa
ggtttcgcatctgttgaagaactggcctatgtcgagccgggcgaaatcgcttccatcgat
ggtttcgatgaggatacggctggcgaaatccaggaacgtgcccgcgaatatctggatcgt
atcgagagcgaacaggatgatcgccgcaaggaactgggcgtcgaagacgaactgcgcgaa
ctgccgggtatcaccacggcaatgctcgtggctgtcggtgaagacggcgtcaagacgatg
gaagactttgccggctatgccgtcgatgatctggtcggctggcgtgaacgcaaggacggt
gaaaccgtcgctcatagcggtatcttctcttccttcgatgtttcgcgcgtcgatgcggaa
cagatggtcctgactgcgcgtttgaaggcaggatggatcacggaagaagaactggcatcg
gctcaggaagaagaagccgaagtcggtgaagaggaagctgcttcctaa
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