Ochrobactrum sp. MT180101: HGK82_12255
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Entry
HGK82_12255 CDS
T07147
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocr03016
]
HGK82_12255 (truB)
Enzymes [BR:
ocr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HGK82_12255 (truB)
Transfer RNA biogenesis [BR:
ocr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HGK82_12255 (truB)
Prokaryotic type
HGK82_12255 (truB)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QOD63533
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All DBs
Position
1:2560962..2561936
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AA seq
324 aa
AA seq
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MARRGKKKGRPISGWVIFDKPKGMGSTEAVSKIKWLFNAEKAGHAGTLDPLASGMLPIAL
GEATKTVPYVMDGTKIYRFTVSWGEERSTDDLEGVATKTSDNRPSRADVEALLPNYTGVI
SQVPPQFSAIKIDGERAYDLAREGETVEIPSREVEIDRLEIVGTPDADRTEFEVECSKGT
YVRSLARDMGRDLGCYGHISELRRIEVAPFTEEDAVTLAELEQAWPPLPPKDEDGNVVEP
APRRDFSAIDALVIDTGAALDCLPQVPLTDDQAQRVRLGNPVILRGRDALLEADEACVTT
RGKLLAIGYIEHGQFKPKRVFTTG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacggggcaagaaaaaaggtcgtccgatatccggctgggttattttcgataag
ccgaaagggatgggatcgaccgaggcggtctcgaagatcaagtggctgttcaacgccgaa
aaagccggtcatgccggtacgcttgatccgcttgcttccggcatgttgcccatagcgctg
ggtgaggccaccaaaaccgtgccttatgtcatggatggaaccaagatctaccgtttcacg
gtaagctggggcgaggaacgctcaacggacgatctggaaggtgttgccaccaagacttcg
gataatcgcccgtcgcgtgccgatgtcgaggcattgctgccgaactacaccggtgtcatt
tcgcaggttccaccgcagttttccgccatcaagatcgatggcgagcgcgcttacgatctt
gctcgcgaaggcgagacggtcgagataccttcccgtgaagtcgagattgaccgcctggaa
atcgttggcactccggatgctgatcgcacagaattcgaggtcgaatgctccaagggcacc
tatgtgcgctctctcgcacgcgatatgggccgggatctcggttgctacggacacatttca
gagctgcgccgcatcgaagttgcgccgttcacggaagaagacgctgtaacactggcagaa
cttgaacaggcttggccgccgcttccgcccaaggatgaggatggcaatgtcgtcgaaccc
gctccgcgtcgcgacttttcggcgattgatgcattggtcatcgatacgggagctgctctc
gattgtctgccgcaggtgccgcttaccgacgatcaggcgcaacgcgtgcgtcttggcaat
ccggtgatcctgcgcggacgcgatgcgcttctggaagcagacgaagcctgtgtcacgaca
cgcggaaaactgctcgccatcggttacatcgagcatggacagttcaaaccgaagcgcgtt
ttcacaacgggctga
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