Ochrobactrum sp. MT180101: HGK82_12505
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Entry
HGK82_12505 CDS
T07147
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr03030
DNA replication
ocr03430
Mismatch repair
ocr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HGK82_12505
03430 Mismatch repair
HGK82_12505
03440 Homologous recombination
HGK82_12505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocr03032
]
HGK82_12505
03400 DNA repair and recombination proteins [BR:
ocr03400
]
HGK82_12505
Enzymes [BR:
ocr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HGK82_12505
DNA replication proteins [BR:
ocr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HGK82_12505
DNA repair and recombination proteins [BR:
ocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HGK82_12505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_16
AAA_30
AAA_5
AAA_14
AAA_18
AAA_19
TsaE
CbiA
VapE-like_dom
AAA_24
SRP54
AAA_33
AAA_2
Rad17
DUF815
ABC_tran
ResIII
SKI
nSTAND3
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QOD63579
LinkDB
All DBs
Position
1:2611863..2613683
Genome browser
AA seq
606 aa
AA seq
DB search
MDTKSADGAYRVLARKYRPQNFNDLIGQEPMVRTLKNAFETGRIAQAWMLTGVRGVGKTT
TARILARALNYKTDTIDQPTIDLSVQGENCQAIMEGRHVDVIEMDAASHTGIDDIREIIE
QVRYRPVSARYKVYIIDEVHMLSNQAFNGLLKTLEEPPPHVKFIFATTEIRKVPITVLSR
CQRFDLRRIESGTLAQHLRRIAEAEQIAVDDTSLAMIARAGEGSARDSLSIFDQAIAHGA
GTVTAEAVRSMLGLADRARIIDLFEMLMRGDVAGALTEFRAQYDVGADPSVVLTDLADFN
HLVTRLRFTPDVAEDVSLSEDERVRGREFAQKLSVRVLSRTWQMLLKGIAEVDTATRPVQ
AAEMLLIRLAHAADLPTLDEAIRGLDNGSVSAPRPQPGNPRPNGGGGAPEARFAADAVGS
SSMAPASGGSATAMRIVETPPQPVQPSAAPQQFVENTPQPSVPVNSLHDVVALADKHRDM
QFKILVKGCVRLASIAPGRLEIGLTDDAPKSLPSDISQRLLNWTGIRWVVTVARDVAGQT
ISEAETERRDNLVTDARADPDVAAILAAFPGAKITDVRIAVPEQNDDEDIDLDAVVETPG
APSEDD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaaatccgccgatggcgcctatcgcgttctcgcccgcaagtatcgcccccag
aatttcaacgaccttatcggccaggagccgatggttcgcacgctcaagaacgcgttcgag
acgggccgcattgcgcaggcctggatgcttaccggcgttcgcggggtcggcaagaccacg
acggcgcgcattctggcgcgtgcgctcaattacaagaccgatacgatcgaccagccgacc
atcgacctttccgtgcagggcgaaaactgccaggcgatcatggaaggccgtcatgtcgat
gtgatcgagatggatgccgcctcgcataccggtatcgacgatatccgcgagatcatcgag
caggtgcgttaccgcccggtttcggcgcgctacaaggtctacatcatcgacgaagtgcac
atgctctccaatcaggctttcaacggcctgttgaagacactggaagagccaccgccgcac
gtcaaattcatctttgccaccaccgaaatccgaaaagttccgatcacggttctgtcgcgc
tgccagcgcttcgacctgcgccgtatcgaatcgggcacgctggcgcagcatctgcgccgc
atcgcggaagcggaacagatcgcggtggatgatacgtcgctcgccatgatcgcacgcgca
ggcgagggctcggcacgcgattcgctgtcgatcttcgatcaggccatcgcgcatggtgcg
ggtactgtcacggcggaagccgtgcgctccatgctgggccttgccgaccgtgcccgtatc
atcgacctcttcgagatgctgatgcgtggcgatgtggctggcgcactgacggaatttcgc
gcgcagtatgatgtcggtgccgacccgtcggtcgtgctgaccgatcttgccgatttcaac
catctcgtgacacgactgcgtttcacgccggatgtggccgaagacgtgtccctgtcggaa
gatgagcgcgtgcgcggtcgtgaattcgcgcagaaactttctgtccgtgtgctgtcgcgc
acctggcagatgctgctcaagggcattgcggaagtcgatacggcgacgagaccggttcag
gctgcagaaatgcttttgatccggcttgcccatgccgcagatctgccgacgctggacgag
gcgattcgcggtctcgacaatggctccgtttcggcgccgcgtccgcagccgggcaatccg
cggccgaatggcggcggtggtgcgccggaagcgcgttttgccgccgatgcggttggatcg
tcttcgatggctccagcttccggtggatcggcaacggccatgcgtatcgtggaaacacca
ccacagccggttcagccgtcagccgcaccgcagcagtttgtcgagaacacgccgcagcct
tcggtgccggtcaacagcttgcatgatgtcgtcgcacttgccgacaagcaccgcgacatg
cagttcaagattctggtcaagggttgcgtgcgccttgcatccattgcacccgggcggctc
gaaatcggcctgaccgacgatgcgccgaaatctctgccgagcgatatttcgcaacgcctc
ctgaactggaccggcattcgctgggtggtgacggtcgcgcgtgacgtggccgggcagacc
atttcggaggcggaaaccgagcgacgcgacaatctggtgaccgatgcccgcgccgatccc
gatgtcgccgctattctcgcggcctttccgggggcaaaaatcaccgacgtgcgcattgcc
gtaccggaacagaatgacgacgaggacattgacctcgatgccgtggtggaaacaccgggc
gcaccgtctgaagacgactga
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