Ochrobactrum sp. MT180101: HGK82_12880
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Entry
HGK82_12880 CDS
T07147
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocr03016
]
HGK82_12880 (thpR)
Enzymes [BR:
ocr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HGK82_12880 (thpR)
Transfer RNA biogenesis [BR:
ocr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HGK82_12880 (thpR)
BRITE hierarchy
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Gene cluster
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
YhiY
Motif
Other DBs
NCBI-ProteinID:
QOD63647
LinkDB
All DBs
Position
1:complement(2690038..2690628)
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AA seq
196 aa
AA seq
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MPRLFTALEIPRDAALSLSLLRGGLPGARWIDVENYHITLRFIGDVEGHVADEVANALDR
VRRPEFMLNLSGVNAFGSKKPHSIYAGVSPSPELNALQAEIERICRRLHIPADPRKFTPH
VTLARLRNPRIEDVVRYLSSRGNFATLPFKVGRFVLMSSRDSVGGGPYIVEEAWPLVARS
GQNWSASAMEAARTIR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcttttcactgccctcgaaatcccgcgcgacgccgcgctttcgctctcgttg
ttgcgaggcggtcttcccggcgcacgctggattgatgtcgaaaactaccacataacgctg
cgttttatcggagatgtggaaggccacgtggccgacgaggttgccaatgcgcttgatcgc
gtgcggcgaccggaattcatgctcaacctgtcgggtgtcaatgctttcggttccaaaaag
ccgcacagcatctatgcgggtgtatccccttcgcctgagctcaacgcattgcaggcggaa
atcgaacggatctgccggcgacttcacattcccgccgacccgcgcaagttcacgccccat
gtgacactggcgcggctgagaaatccccgcatcgaggatgtggtgcgctatctctcctca
cgtggcaacttcgcgacgctgcccttcaaggtgggacggttcgtgctgatgtcgtcacgc
gattccgtcggtggcggaccttatatcgtggaggaagcctggcctttggttgcccgttcc
ggccagaactggtcggcaagcgcgatggaggctgccagaaccatacggtaa
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