Ochrobactrum sp. MT180101: HGK82_14785
Help
Entry
HGK82_14785 CDS
T07147
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocr03032
]
HGK82_14785
03400 DNA repair and recombination proteins [BR:
ocr03400
]
HGK82_14785
Enzymes [BR:
ocr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HGK82_14785
DNA replication proteins [BR:
ocr03032
]
Prokaryotic type
DNA Topoisomerases
HGK82_14785
DNA repair and recombination proteins [BR:
ocr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HGK82_14785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QOD66823
LinkDB
All DBs
Position
2:complement(284280..285341)
Genome browser
AA seq
353 aa
AA seq
DB search
MLKKSSAVPLLQNNAAHELVHVSDTAPGIRRLRCGARFRYVRFDKKAISVADRNRIAKPA
IPPAWNDVWICCDQRGHIQATGRDTRGRKQYRYHSAWMAMQEETKFSSLPDFAGALSRLR
KVVDIDMRRRSLCREKVVATVIWLMDRLLLRVGNPDYARDNKSFGVTTLRNRHLRDERGG
LRLAFTGKSGKMWSLKLSDKRIARIIRSIQELPGQQLFQYIDGAGDRCPVSSQDINDYLR
VTMRSDFTSKHFRTWAATATALELLRCLDLPDSDRAQKQRLNSAIDKVAHMLGNTRTVCR
QSYIHPAIPEHWLAGKLGSQIDAAGAIRLVAPELSDAERRTLKWLLFIDAEKS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaaaaagtcttccgctgttccgctgctacaaaacaatgctgctcatgagttggtc
catgtcagcgacaccgcgccgggaattaggcgcctgcgttgtggagccaggtttcgttat
gttcggtttgacaaaaaggcgatttcagtcgcggatcgaaacaggattgctaagcctgcc
attccgcctgcttggaacgatgtctggatatgttgcgatcagcgcggacatatacaggca
accgggcgtgatacgcgcggaagaaagcaatatcgttatcactccgcgtggatggcgatg
caggaggaaaccaaattttcaagtctgccagatttcgccggtgcactcagccgactgcgc
aaagtggtcgatatcgatatgcggcgacgctcgctctgtcgtgaaaaggtcgttgcgacc
gtcatctggctgatggatcgactattgctgcgggtcggaaatccagattatgcacgcgac
aacaagagctttggggtcactacgcttcgcaatcggcatttgcgggatgagcgtggcgga
ttgcggctcgcatttactggcaaatcgggcaaaatgtggagtctcaagctttccgataaa
cgaattgcgcgtatcatacgctccatacaggaactgcctgggcagcagttatttcaatat
attgacggggcgggtgatcgctgtcccgtctcctctcaggatataaatgactatctgcga
gtgactatgcggtccgatttcacgtcgaagcattttcgaacttgggctgcaacggcaact
gcccttgagttgctacgctgtctcgatttgcctgacagtgacagggcgcaaaagcaaagg
cttaatagcgcaatcgataaggttgcgcacatgctcggcaatacaagaacggtatgccgg
cagtcttacatacatcctgccatccccgaacactggctggccggaaaacttggctcgcag
atcgatgccgctggagctatccggctagttgcgcccgaacttagcgatgccgagcgtcgc
actttgaaatggctacttttcatcgatgcggaaaagagctga
DBGET
integrated database retrieval system
