Ochrobactrum sp. MT180101: HGK82_16005
Help
Entry
HGK82_16005 CDS
T07147
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
KO
K19231
fibronectin-binding autotransporter adhesin
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocr02000
]
HGK82_16005
Transporters [BR:
ocr02000
]
Other transporters
Pores ion channels [TC:
1
]
HGK82_16005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
AC_1
Pertactin
Motif
Other DBs
NCBI-ProteinID:
QOD66423
LinkDB
All DBs
Position
2:568397..573112
Genome browser
AA seq
1571 aa
AA seq
DB search
MLHRKCALLSTCSAFAFTVLLPAAIYLVPSQALAACTTTGGSTTCTSTAPAVWTATVGTG
RSDNNRSVDVQSGAGINTNNAPAISIGDGSTINVRNGASVTNNSTPSGSGPFGTGPNTIE
FGSNGRLTIDQGGQVIANGTNTRAEAVNVHGYGNTIINRGLIQGQSSAAIWFEDQVTGAK
NTVDNYGTIQKLGGGSVIGTNGGAGINFINRTGAQVVGDLSFAGGNDTLTFEPNSVVTGN
INGGGGVNDLILQGILGSSDTLAGALRNFTTLTKNGDGLWTVSGSLTGFTTVTVNDGTLA
LTGNNKDYTGNVIVRPDGVLEARAQSLPVKTVIANNVNNVQNDGLVRFTQPDDGTYIGQI
VGSGAVEKTGAGVLTLTPAAPAGNTYFGGTRINGGTIAVSADNALGNANGGLTLDSGTLR
FDTSFDLASSRAIVLNAGGGTFDTNNNTTNVTQAITGSGGLTKAGDGVLNLEGSNAFGGA
TTVTGGALYVNGNQSAATGVTDVGTGATIGGAGTIGGDVTIQNGGTLAPGRAGAVPGALT
INGDLALSDGSALEYSFGQANVVGGALNDLTTVHGNLTLDGTINVVATPGGSFDPGVYRV
ISYDGTLTDNGLAVGTIPASGYYVQTAVANQVNLVNTSGLNLNYWDVWPASNGAIGNGAV
NGGTGTWQSSGSGGSNINWTEPTGAINAPYQDDAFAIFMATAGTVTVDNSVGAVRAAGMQ
FASDGYVVTGDQITLVGAPSSIIRVGDGTAAGAGYTATINSVLTGNTQLTKTDLGTLVLQ
GNNSYTGGTAINGGVLQIASNVNLGGATGGMSFNGGTLRTTTDFTIDRATVLESRGGTID
TFGATRLDYDGVISGNGGLTKIGTGTLVLNGENTYAGGTAVNGGTVQISSDANLGAASGP
LGINGGTLHSTGNIAMNRATTIGAGNATIETDAGTILTQQGNIAGTGALTKTGDGALVLT
SAGTYSGGTTISSGLLQLGDGGTSGSIVGDVNNNGILAFNRSDALVFDGVISGTGNVRQI
GSGVTILNNQSAYSGATSVEAGTLAAGGVNYFSSNSDFTVAQTGTLALNDFNQSLKSLSN
SGIVDLGPEAGTTLIVTSDYTGNGGTVRIGTVLGNDSSATDRLVVNGNTSGTGVLAVKNV
NGSGAQTNEGIKIVDIAGVSNATFTLLGDYEFQGAPAVVGGAYAYQLYKNGKTNPNDGDW
YLRSTIKNPIDGGGTNGGNDGDGGEEIPLYQPGVPGYEAYPQLLLGLNGLPTLQQRVGNR
YWSNAGNIMLAEGADPVGSPYAPAEEAGNLIEGNGVWGRIEGAHTKADPRFSTSGTDYSF
NTLKLQAGLEGMLAETENGKLIGGITIHYTHGKAKTRSVYGDGEISTDGYGFGGTLTWYG
DNGFYLDGQTQVTWYDSDLMSYLANMGLADGNNGLGYAFSAESGKRVAIDQNWSVTPQAQ
LTYSNVDFDSFNDAFGARISLDRGESLQGRIGLAVEHQNSWYNASGLIDRTYLYGIANVY
YEFLDGTKVDVSGTSFASKNERLWGGIGLGGSYNWNGDKYSIYGEGTVNTSLENFADSYS
YKGTLGFRVRF
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaccggaaatgcgcccttctttcgacgtgttcggcgtttgcgttcactgttctt
cttccggccgctatttatctggttccatcgcaggctttggccgcatgtacgacaacgggc
ggttcaacgacgtgtacgtcgaccgcaccggcagtgtggacagcaactgtgggtacgggg
cgttcggataacaatcggtctgttgatgtgcagtcaggagcaggaataaacacaaataac
gctcctgccatcagtatcggagatggcagtacgatcaatgtccgtaatggcgcaagcgtc
acaaacaactccactccatccggttcgggcccattcggtaccggtcccaataccattgaa
ttcggcagcaacggacggctaacaatcgatcaaggcggccaggttattgcaaacggcacc
aatacgcgggccgaagccgtcaacgtgcatggttacggcaacactatcatcaatcgaggc
ctgattcaggggcaaagtagtgcggcgatctggttcgaagatcaggtaaccggcgccaag
aatacggtggataactacggaactatccagaaactcggcggtggtagcgtcatcggaacc
aacggcggtgccggtatcaacttcatcaaccgtactggcgctcaggtcgtcggcgacctg
agcttcgcaggtggcaacgatacgctcacatttgaaccaaactcagtcgtaacgggtaac
attaacggcggcggcggcgttaatgatctgattttgcaaggtattttgggttccagtgat
acgcttgcaggtgcactcagaaactttaccaccctgacgaagaacggtgatggactctgg
acggtaagtggtagccttacagggttcactacagttacagtgaatgatggaacgctggcc
ctgacaggtaacaataaagattataccggcaacgtgattgttcgtccggatggcgttcta
gaagcgcgtgcgcaaagtctgcccgttaaaaccgtaatagccaacaacgtcaataacgtg
cagaacgacggcctcgttcgcttcacccaaccggacgacggcacttatattggccagatc
gtgggctctggcgcggtcgagaaaaccggcgctggggttctgaccttgacgcctgctgcc
ccggctgggaacacttattttggtggtacaagaattaatggaggcacgatcgctgtctcg
gccgacaatgccttgggcaatgcgaatggcggcctcactctcgatagtggcacactgcgt
ttcgacacttcgttcgatctcgcgagcagtcgtgctattgttcttaatgcaggtggcggc
acgttcgatacgaataacaacacgaccaatgtaacccaggcaattacgggttcgggcggc
cttaccaaggccggtgacggtgtgctcaaccttgagggatccaatgcctttggtggcgcg
actacggtaacgggcggcgcactttatgtgaatggcaatcaaagcgctgccacgggtgtg
acagatgtaggaactggcgcaacaattggcggtgctggcacgatcggtggcgatgtcaca
atacagaatggcggtacgcttgcacccggccgtgcaggggccgttcccggagcgctgaca
atcaacggagatctcgcacttagtgatggctcggcgctcgaatacagtttcggacaggcc
aatgtagttgggggagcactcaacgacctgacaacagttcatggaaacctaaccctcgac
ggcacgatcaacgttgttgccactccgggcggatcgttcgaccccggagtttaccgtgtc
atcagctatgacggcaccttgaccgataacggtttggcggttggaacaatccccgcgagc
ggctactacgttcagacggcggtcgcaaatcaggtcaatctggtcaatacgagcggattg
aatttgaactattgggacgtgtggccggcatcaaatggtgcaattggcaacggggcggta
aatggtggcaccggtacatggcagagttcggggtccggtggatccaatatcaactggacc
gaaccaacgggagctatcaacgcaccatatcaggacgatgccttcgccatctttatggcc
acggccggaactgtaactgtcgacaatagcgttggtgcagttcgtgcggcaggcatgcag
tttgcgagcgacggttatgtcgttaccggagatcagatcactttagtgggggctccctcg
tcgattatccgtgtgggtgatggtacggctgcaggtgccggttataccgcgacgattaac
tcggtacttaccggtaacacccaactgaccaagacagatctcggcacactggttctccag
ggcaacaatagctatacaggcggtacggcgatcaatggcggcgtgctacagatcgcgagc
aatgttaatctcggtggtgcaacgggtggcatgtcctttaatggcggcacactgagaacg
acaaccgatttcacgattgatcgcgctacggtgcttgagtcccggggtggtacgatcgat
acgtttggtgcgacgaggctcgattatgacggtgtgataagcggcaatggcggactaacg
aaaatcggcactggtacgcttgtcctgaatggcgagaatacttacgctggcggaaccgcg
gtcaacggtggaactgttcagatcagttcggatgcaaacctaggggcagcttccgggccg
cttggcatcaacggaggcacactgcattcgaccggcaatatcgcgatgaatcgcgcgacg
accataggggctggcaatgcgacaatcgaaaccgatgcggggacgatcctcacccagcag
ggaaatatcgccggaacaggcgcactgaccaaaaccggcgacggtgcactggtccttacg
agtgcgggaacctacagtggcggcaccaccatttcatcagggctgcttcagcttggcgat
ggcgggacatcgggctcaattgtcggcgacgtcaacaacaatggtattctggcattcaac
aggtctgacgcactcgtgttcgatggcgtgatctccggaacaggtaatgttaggcagatc
ggatccggcgtcaccattctcaacaatcagagtgcctactcgggcgcgacatctgtcgag
gcgggaacgctcgcggcgggcggagtgaattatttcagctccaactctgatttcactgtg
gcccagaccggtactctggcactcaatgatttcaaccagtcgctcaaatcattgagcaat
tcaggaattgtcgaccttggaccggaagcagggaccacgttaatcgtgaccagcgactat
accggaaatggcgggaccgtccggatcggaactgtgcttggcaacgacagttccgcaaca
gacagactggtcgtcaatggcaacacgagtggaaccggcgttctggctgtcaagaatgtc
aatggcagcggcgcccagacgaatgagggcatcaagattgtcgacattgctggcgtgtcc
aatgcaacatttacgttgctgggcgactatgagtttcagggcgcaccagctgtagtcggt
ggtgcttatgcctatcaactctacaaaaatggcaaaaccaatccgaacgatggcgattgg
tatctgcgctcgactatcaaaaacccgattgatggcggtggaacaaatggcggcaatgat
ggtgatggcggcgaggaaatcccgctctaccagccgggtgtccctggttacgaagcctat
ccacagcttctgctgggtctgaacggcctgcccacgttgcaacagcgcgtcggcaatcgc
tactggagcaatgcaggcaatatcatgctcgcagaaggcgctgatccggtcggctctccc
tatgctccagcagaagaagctggcaatctgattgagggtaacggcgtgtgggggcgcatt
gaaggcgctcacacaaaggccgatccacgtttttccacgtctgggacggattacagtttc
aacacactcaaactgcaggctggcctcgaaggcatgctggctgagacggaaaacggaaag
ctgattggcgggatcactattcactatactcacggtaaggccaaaacacgttcggtctac
ggggacggcgaaatttcgacagacggttacggctttggcggtacgctgacttggtatggc
gataacggcttctaccttgatggccagactcaggttacctggtatgacagcgatcttatg
tcttatcttgccaatatgggactggcagacgggaacaacggtttgggttatgccttctct
gcggaaagcggcaagcgggttgcgatcgatcaaaactggtcggttacgccacaggcacag
ttgacctactcgaatgtcgatttcgacagcttcaatgatgccttcggtgcgcggatcagc
cttgatcgtggtgagagtctgcagggccgcatcggactggctgttgaacaccagaactcc
tggtacaacgccagcggcctcatcgacagaacctacctctatggtatcgcgaacgtctat
tacgagttcctcgatggaaccaaggtcgatgtttcaggaacgagttttgccagcaagaac
gaacgtctttggggtggtatcggattgggtggcagctataactggaacggagacaaatac
tcgatctatggcgagggaactgtcaataccagtctcgaaaactttgccgatagctatagt
tataaaggtacactgggcttccgagtgcggttctag
DBGET
integrated database retrieval system
