Ochrobactrum sp. MT180101: HGK82_16005
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Entry
HGK82_16005 CDS
T07147
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
ocr
Ochrobactrum sp. MT180101
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Ortholog
Paralog
GFIT
Motif
Pfam:
PATR
Autotransporter
AC_1
Pertactin
Motif
Other DBs
NCBI-ProteinID:
QOD66423
LinkDB
All DBs
Position
2:568397..573112
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AA seq
1571 aa
AA seq
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MLHRKCALLSTCSAFAFTVLLPAAIYLVPSQALAACTTTGGSTTCTSTAPAVWTATVGTG
RSDNNRSVDVQSGAGINTNNAPAISIGDGSTINVRNGASVTNNSTPSGSGPFGTGPNTIE
FGSNGRLTIDQGGQVIANGTNTRAEAVNVHGYGNTIINRGLIQGQSSAAIWFEDQVTGAK
NTVDNYGTIQKLGGGSVIGTNGGAGINFINRTGAQVVGDLSFAGGNDTLTFEPNSVVTGN
INGGGGVNDLILQGILGSSDTLAGALRNFTTLTKNGDGLWTVSGSLTGFTTVTVNDGTLA
LTGNNKDYTGNVIVRPDGVLEARAQSLPVKTVIANNVNNVQNDGLVRFTQPDDGTYIGQI
VGSGAVEKTGAGVLTLTPAAPAGNTYFGGTRINGGTIAVSADNALGNANGGLTLDSGTLR
FDTSFDLASSRAIVLNAGGGTFDTNNNTTNVTQAITGSGGLTKAGDGVLNLEGSNAFGGA
TTVTGGALYVNGNQSAATGVTDVGTGATIGGAGTIGGDVTIQNGGTLAPGRAGAVPGALT
INGDLALSDGSALEYSFGQANVVGGALNDLTTVHGNLTLDGTINVVATPGGSFDPGVYRV
ISYDGTLTDNGLAVGTIPASGYYVQTAVANQVNLVNTSGLNLNYWDVWPASNGAIGNGAV
NGGTGTWQSSGSGGSNINWTEPTGAINAPYQDDAFAIFMATAGTVTVDNSVGAVRAAGMQ
FASDGYVVTGDQITLVGAPSSIIRVGDGTAAGAGYTATINSVLTGNTQLTKTDLGTLVLQ
GNNSYTGGTAINGGVLQIASNVNLGGATGGMSFNGGTLRTTTDFTIDRATVLESRGGTID
TFGATRLDYDGVISGNGGLTKIGTGTLVLNGENTYAGGTAVNGGTVQISSDANLGAASGP
LGINGGTLHSTGNIAMNRATTIGAGNATIETDAGTILTQQGNIAGTGALTKTGDGALVLT
SAGTYSGGTTISSGLLQLGDGGTSGSIVGDVNNNGILAFNRSDALVFDGVISGTGNVRQI
GSGVTILNNQSAYSGATSVEAGTLAAGGVNYFSSNSDFTVAQTGTLALNDFNQSLKSLSN
SGIVDLGPEAGTTLIVTSDYTGNGGTVRIGTVLGNDSSATDRLVVNGNTSGTGVLAVKNV
NGSGAQTNEGIKIVDIAGVSNATFTLLGDYEFQGAPAVVGGAYAYQLYKNGKTNPNDGDW
YLRSTIKNPIDGGGTNGGNDGDGGEEIPLYQPGVPGYEAYPQLLLGLNGLPTLQQRVGNR
YWSNAGNIMLAEGADPVGSPYAPAEEAGNLIEGNGVWGRIEGAHTKADPRFSTSGTDYSF
NTLKLQAGLEGMLAETENGKLIGGITIHYTHGKAKTRSVYGDGEISTDGYGFGGTLTWYG
DNGFYLDGQTQVTWYDSDLMSYLANMGLADGNNGLGYAFSAESGKRVAIDQNWSVTPQAQ
LTYSNVDFDSFNDAFGARISLDRGESLQGRIGLAVEHQNSWYNASGLIDRTYLYGIANVY
YEFLDGTKVDVSGTSFASKNERLWGGIGLGGSYNWNGDKYSIYGEGTVNTSLENFADSYS
YKGTLGFRVRF
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaccggaaatgcgcccttctttcgacgtgttcggcgtttgcgttcactgttctt
cttccggccgctatttatctggttccatcgcaggctttggccgcatgtacgacaacgggc
ggttcaacgacgtgtacgtcgaccgcaccggcagtgtggacagcaactgtgggtacgggg
cgttcggataacaatcggtctgttgatgtgcagtcaggagcaggaataaacacaaataac
gctcctgccatcagtatcggagatggcagtacgatcaatgtccgtaatggcgcaagcgtc
acaaacaactccactccatccggttcgggcccattcggtaccggtcccaataccattgaa
ttcggcagcaacggacggctaacaatcgatcaaggcggccaggttattgcaaacggcacc
aatacgcgggccgaagccgtcaacgtgcatggttacggcaacactatcatcaatcgaggc
ctgattcaggggcaaagtagtgcggcgatctggttcgaagatcaggtaaccggcgccaag
aatacggtggataactacggaactatccagaaactcggcggtggtagcgtcatcggaacc
aacggcggtgccggtatcaacttcatcaaccgtactggcgctcaggtcgtcggcgacctg
agcttcgcaggtggcaacgatacgctcacatttgaaccaaactcagtcgtaacgggtaac
attaacggcggcggcggcgttaatgatctgattttgcaaggtattttgggttccagtgat
acgcttgcaggtgcactcagaaactttaccaccctgacgaagaacggtgatggactctgg
acggtaagtggtagccttacagggttcactacagttacagtgaatgatggaacgctggcc
ctgacaggtaacaataaagattataccggcaacgtgattgttcgtccggatggcgttcta
gaagcgcgtgcgcaaagtctgcccgttaaaaccgtaatagccaacaacgtcaataacgtg
cagaacgacggcctcgttcgcttcacccaaccggacgacggcacttatattggccagatc
gtgggctctggcgcggtcgagaaaaccggcgctggggttctgaccttgacgcctgctgcc
ccggctgggaacacttattttggtggtacaagaattaatggaggcacgatcgctgtctcg
gccgacaatgccttgggcaatgcgaatggcggcctcactctcgatagtggcacactgcgt
ttcgacacttcgttcgatctcgcgagcagtcgtgctattgttcttaatgcaggtggcggc
acgttcgatacgaataacaacacgaccaatgtaacccaggcaattacgggttcgggcggc
cttaccaaggccggtgacggtgtgctcaaccttgagggatccaatgcctttggtggcgcg
actacggtaacgggcggcgcactttatgtgaatggcaatcaaagcgctgccacgggtgtg
acagatgtaggaactggcgcaacaattggcggtgctggcacgatcggtggcgatgtcaca
atacagaatggcggtacgcttgcacccggccgtgcaggggccgttcccggagcgctgaca
atcaacggagatctcgcacttagtgatggctcggcgctcgaatacagtttcggacaggcc
aatgtagttgggggagcactcaacgacctgacaacagttcatggaaacctaaccctcgac
ggcacgatcaacgttgttgccactccgggcggatcgttcgaccccggagtttaccgtgtc
atcagctatgacggcaccttgaccgataacggtttggcggttggaacaatccccgcgagc
ggctactacgttcagacggcggtcgcaaatcaggtcaatctggtcaatacgagcggattg
aatttgaactattgggacgtgtggccggcatcaaatggtgcaattggcaacggggcggta
aatggtggcaccggtacatggcagagttcggggtccggtggatccaatatcaactggacc
gaaccaacgggagctatcaacgcaccatatcaggacgatgccttcgccatctttatggcc
acggccggaactgtaactgtcgacaatagcgttggtgcagttcgtgcggcaggcatgcag
tttgcgagcgacggttatgtcgttaccggagatcagatcactttagtgggggctccctcg
tcgattatccgtgtgggtgatggtacggctgcaggtgccggttataccgcgacgattaac
tcggtacttaccggtaacacccaactgaccaagacagatctcggcacactggttctccag
ggcaacaatagctatacaggcggtacggcgatcaatggcggcgtgctacagatcgcgagc
aatgttaatctcggtggtgcaacgggtggcatgtcctttaatggcggcacactgagaacg
acaaccgatttcacgattgatcgcgctacggtgcttgagtcccggggtggtacgatcgat
acgtttggtgcgacgaggctcgattatgacggtgtgataagcggcaatggcggactaacg
aaaatcggcactggtacgcttgtcctgaatggcgagaatacttacgctggcggaaccgcg
gtcaacggtggaactgttcagatcagttcggatgcaaacctaggggcagcttccgggccg
cttggcatcaacggaggcacactgcattcgaccggcaatatcgcgatgaatcgcgcgacg
accataggggctggcaatgcgacaatcgaaaccgatgcggggacgatcctcacccagcag
ggaaatatcgccggaacaggcgcactgaccaaaaccggcgacggtgcactggtccttacg
agtgcgggaacctacagtggcggcaccaccatttcatcagggctgcttcagcttggcgat
ggcgggacatcgggctcaattgtcggcgacgtcaacaacaatggtattctggcattcaac
aggtctgacgcactcgtgttcgatggcgtgatctccggaacaggtaatgttaggcagatc
ggatccggcgtcaccattctcaacaatcagagtgcctactcgggcgcgacatctgtcgag
gcgggaacgctcgcggcgggcggagtgaattatttcagctccaactctgatttcactgtg
gcccagaccggtactctggcactcaatgatttcaaccagtcgctcaaatcattgagcaat
tcaggaattgtcgaccttggaccggaagcagggaccacgttaatcgtgaccagcgactat
accggaaatggcgggaccgtccggatcggaactgtgcttggcaacgacagttccgcaaca
gacagactggtcgtcaatggcaacacgagtggaaccggcgttctggctgtcaagaatgtc
aatggcagcggcgcccagacgaatgagggcatcaagattgtcgacattgctggcgtgtcc
aatgcaacatttacgttgctgggcgactatgagtttcagggcgcaccagctgtagtcggt
ggtgcttatgcctatcaactctacaaaaatggcaaaaccaatccgaacgatggcgattgg
tatctgcgctcgactatcaaaaacccgattgatggcggtggaacaaatggcggcaatgat
ggtgatggcggcgaggaaatcccgctctaccagccgggtgtccctggttacgaagcctat
ccacagcttctgctgggtctgaacggcctgcccacgttgcaacagcgcgtcggcaatcgc
tactggagcaatgcaggcaatatcatgctcgcagaaggcgctgatccggtcggctctccc
tatgctccagcagaagaagctggcaatctgattgagggtaacggcgtgtgggggcgcatt
gaaggcgctcacacaaaggccgatccacgtttttccacgtctgggacggattacagtttc
aacacactcaaactgcaggctggcctcgaaggcatgctggctgagacggaaaacggaaag
ctgattggcgggatcactattcactatactcacggtaaggccaaaacacgttcggtctac
ggggacggcgaaatttcgacagacggttacggctttggcggtacgctgacttggtatggc
gataacggcttctaccttgatggccagactcaggttacctggtatgacagcgatcttatg
tcttatcttgccaatatgggactggcagacgggaacaacggtttgggttatgccttctct
gcggaaagcggcaagcgggttgcgatcgatcaaaactggtcggttacgccacaggcacag
ttgacctactcgaatgtcgatttcgacagcttcaatgatgccttcggtgcgcggatcagc
cttgatcgtggtgagagtctgcagggccgcatcggactggctgttgaacaccagaactcc
tggtacaacgccagcggcctcatcgacagaacctacctctatggtatcgcgaacgtctat
tacgagttcctcgatggaaccaaggtcgatgtttcaggaacgagttttgccagcaagaac
gaacgtctttggggtggtatcggattgggtggcagctataactggaacggagacaaatac
tcgatctatggcgagggaactgtcaataccagtctcgaaaactttgccgatagctatagt
tataaaggtacactgggcttccgagtgcggttctag
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