Ochrobactrum sp. MT180101: HGK82_18400
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Entry
HGK82_18400 CDS
T07147
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocr03009
]
HGK82_18400
Enzymes [BR:
ocr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HGK82_18400
Ribosome biogenesis [BR:
ocr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HGK82_18400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
RsmF-B_ferredox
Ubie_methyltran
Methyltransf_25
FtsJ
MTS
PrmA
Methyltransf_15
SBP_bac_5
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
QOD65102
LinkDB
All DBs
Position
2:1090516..1091805
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AA seq
429 aa
AA seq
DB search
MRLGGRLQAAIEVLDQIEAGTRPASDVLKDWGASHRFAGAGDRAVIGNIVYDALRRKLSI
AWRMDGDDARALAFGALLADGGMDIATIDAALDGDKFAPKVLEQPRRIAWESRDVTEAPA
HVQADVPEWCASSLEELFGARWVDEGRALATRPPVDLRVNSLKATPEKTLTALEKAGAAP
APFLAQALRIPPIEALGRHPNVQGEQAFLDGWFEVQDLGSQLAALFAGAKPGQQVLDYCA
GAGGKTLALAAAMQNSGQIHAYDAERARLSPMHERLQRAGVRNTQVHGNLDALDPLTGQM
DLVLTDAPCTGSGTWRRRPDAKWRLNDQQLERRVQDQKEVLESAKHYVKPGGRLAYITCS
LFAEENTRQIAQFLTGNADFTEVAPEALWDTIVADAGDVKPVFSSHGAVFSPLSTGTDGF
YVSLLQRSN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttggcggacgcctgcaggcggctatcgaggtattggatcagattgaagcgggt
acacgcccggcttctgacgtgctgaaggattggggcgcttcccatcgtttcgcaggtgcg
ggtgaccgcgctgtgatcggcaacatcgtctatgatgcgctgcgccgcaagttgtccatc
gcgtggcgaatggatggcgatgatgcgcgcgctctggcttttggcgcactattggccgac
ggcggcatggatattgcgaccatcgacgctgctctcgatggagacaagtttgcgccgaaa
gtgctggagcagccgcgtcgtattgcttgggaaagcagggatgtcactgaagcgcctgcc
catgttcaggcggatgtgcccgaatggtgtgcatcgtcgcttgaggaacttttcggcgcg
cgctgggtggatgaaggcagggcgctggcaacgcgaccgccagtcgatcttcgtgtgaac
agtttgaaggcgacgccggaaaaaacgctcacagcacttgaaaaggctggtgctgcaccc
gcgccgttccttgcgcaggcgctacgcatcccgccgattgaagcacttggacgccatccg
aatgtgcagggcgagcaggcctttctcgacggctggttcgaggtccaggatttggggtca
cagcttgctgcgctctttgccggtgccaaacccggccagcaggtactggactattgcgct
ggagctggtggaaagacattggctttggccgctgcgatgcagaatagcggtcaaattcat
gcctatgatgctgaacgtgcgcggctttcgcccatgcatgagcggctacagcgtgctggg
gtgcgtaacacgcaggtccatggaaatctcgatgcactggacccactgacagggcagatg
gatctcgtgctgaccgatgcgccttgcactggttccggcacatggcgccgccgcccggat
gcgaaatggcggttgaacgaccagcagcttgagcggcgcgttcaagaccagaaggaagtg
ctggaatctgccaagcattatgtgaagccgggcggacgtctggcctatattacctgttca
ttgttcgcagaagaaaacacgagacagattgcacagtttctcacagggaatgctgatttt
acggaagttgcgccagaggctttgtgggatacaattgtagcggacgctggtgatgtgaag
ccagtattctcgtcgcacggcgcggtattctcgccattgtccactggcactgacgggttt
tatgtgagccttctgcagagatcaaactaa
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