Ochrobactrum sp. MT180101: HGK82_20365
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Entry
HGK82_20365 CDS
T07147
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HGK82_20365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocr02000
]
HGK82_20365
Transporters [BR:
ocr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HGK82_20365
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_22
AAA_23
AAA_29
nSTAND3
RecA_N
AAA_16
nSTAND_NTPase5
RsgA_GTPase
nSTAND1
Rad17
NACHT
AAA
ORC-CDC6-like
AAA_28
NB-ARC
ATPase_2
AAA_30
AAA_19
Mg_chelatase
AAA_14
cobW
AAA_15
AAA_13
Motif
Other DBs
NCBI-ProteinID:
QOD65468
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Position
2:1543666..1544805
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AA seq
379 aa
AA seq
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MNTTETGTGRKVSNGPAAVSVNNVSMIYNGFHAVRAASFDLAKGRFLTILGPSGSGKTTL
LRLIAGFQKPSIGEIFINDEAVSAVPPHKRSIGMVFQKLALFPHMTAAENVAFPLKMRRF
DARSIPERVERYLDLVRLNGLGGRRVHELSGGQQQRVAIARALVFEPDLLLLDEPLAALD
RKLREEMQLEFRRIQRELGVTTINVTHDQREALVVSDEIIVMDGGEIQQMAQPSETYRNP
SNAFVANFIGVTNFISGKASSLDGNLVRVDAGIALVGMAGEGRGPIGSGANVSCAIRAEQ
IRIGGSAAAHAELDTVLEGIVTDAIFEGERIVYELQVPALGDDVLMRVFDHDPIGHSQFA
EGETVHLGWNARDLIVFAA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaccgaaaccggaactggccgtaaagtctccaacggaccggctgccgtatcg
gtcaacaatgtcagcatgatctataacggcttccatgccgtgcgtgcggcatctttcgat
ctcgccaagggccgttttctgaccattctcgggccgtccggctccggcaagacgacactt
ctccgcctcatcgccggtttccagaaaccgagcatcggtgaaatattcatcaacgatgaa
gctgtcagcgccgtaccgccgcacaagcgctccatcggcatggttttccagaagcttgcg
cttttcccgcatatgacggccgctgaaaatgtcgcctttccgctgaaaatgcgccgcttc
gatgcgcgttcgatccccgagcgcgtagagcgttatctcgacctcgtgcgtctgaacggc
ctcggcggacggcgcgtgcacgagctttccggtggccagcagcagcgtgtcgccatcgcg
cgcgccctcgttttcgaaccggacctgcttctgctcgacgaacctctggcagcgcttgac
cgcaagctgcgcgaggaaatgcagctcgaatttcgccgtatccagcgcgaacttggcgtt
acgaccatcaatgtcacccatgaccagcgcgaagcgctcgtcgtatctgacgaaatcatc
gtcatggatggcggcgaaattcagcagatggcgcagccatccgagacctatcgcaatccg
tccaacgcctttgtggcgaacttcatcggcgtcaccaatttcatttccggcaaggcgtct
tcgctcgacggcaatctcgtgcgggtcgatgccggaatagctctggtaggcatggcaggc
gaggggcgcggaccgattggctccggcgcaaatgtctcgtgtgcaatccgcgccgaacag
atccgtatcggcggcagcgccgcagcacatgcagaactcgataccgtgcttgaaggcatt
gttaccgacgcgatttttgaaggcgaacgcatcgtctatgaattgcaggttcctgccttg
ggagatgatgtgttgatgcgcgtcttcgaccacgatcccatcggccatagccagtttgcg
gaaggtgaaaccgtgcatcttggctggaacgcccgcgatctcatcgtctttgccgcatga
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