Ochrobactrum sp. MT180101: HGK82_20625
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Entry
HGK82_20625 CDS
T07147
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocr03009
]
HGK82_20625 (rimO)
Enzymes [BR:
ocr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HGK82_20625 (rimO)
Ribosome biogenesis [BR:
ocr03009
]
Prokaryotic type
ribosomal protein modification factors
HGK82_20625 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
DUF3185
Motif
Other DBs
NCBI-ProteinID:
QOD65519
LinkDB
All DBs
Position
2:1597662..1598975
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AA seq
437 aa
AA seq
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MSAPRVSFVSLGCPKALVDSERIITSLRSEGYEISRKHDGADLVIVNTCGFLDSARDESL
DAIGLALNENGKVIVTGCLGAEPDVIRERHPNVLAITGPQAYESVMSAVHEAVPPAHDPF
VDLVPPQGVKLTPRHYAYLKISEGCSNRCSFCIIPALRGDLVSRPIDQVLREAEKLVTAG
VKEILVISQDTSAYGLDIKYQEAMWQDRTVRTKFLDLSRELGDMGVWVRMHYVYPYPHVD
EVIPLMAEGKILPYLDIPFQHASPAVLKNMRRPAHQEKTSRRIQAWRETCPDLAVRSTFI
VGYPGETEEDFEILLDWLDEAKIERAGCFKYEPVKGAKANDLGLEQVPEEIKEARWHRFM
AKQQQISTNLLKRKVGKRLPVIIDEANGTIGKGRTRYDAPEIDGSVHIQSRRPLRVGDIV
TVKIEASDAYDLHGIAV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccgcgcgtcagtttcgtttctcttggctgcccgaaggcgcttgtcgattcc
gaacgcatcatcaccagccttcgctccgagggctatgaaatctcccgcaagcatgacggt
gccgatctggtgatcgtcaatacctgcggctttcttgattccgcacgcgatgaatcgctg
gatgccattggccttgctctcaacgagaacggcaaggtcatcgtaaccggctgccttggc
gcagaacccgatgtcatccgtgagcgccatccgaacgtactggccatcaccggcccgcag
gcttatgaaagcgtaatgagcgcggtgcatgaagccgtccctcccgcgcacgatccattt
gtggacctggtgccgccgcagggcgtgaagctcaccccgcgccactacgcctacctcaaa
atctccgaaggctgttcgaaccgctgctccttctgcatcattccggcgctgcgcggcgat
ctcgtctcgcgcccgattgatcaggtgctgcgcgaggccgagaagctggtgactgctggc
gtgaaggaaatcctcgtcatctcgcaggatacgagcgcctatggcctcgacatcaagtat
caggaagccatgtggcaggaccgcacggttcgcaccaagttcctcgacctctcgcgtgaa
ctgggcgatatgggcgtgtgggtgcgtatgcactacgtatacccttacccgcatgtcgat
gaagtcattccgctgatggctgaaggcaagattctgccttatctggatattcctttccag
cacgcctccccggcggttctgaagaatatgcgccgtccggcacatcaggaaaagacctcg
cgccgcattcaggcctggcgggagacctgcccggacctggccgtgcgttccacctttatc
gtcggctatcccggcgaaacggaagaagatttcgaaatacttctcgactggctcgatgaa
gccaagatcgaacgcgccggctgcttcaaatatgaaccggtcaagggtgcaaaggccaat
gatcttggtctcgagcaggtgccggaagaaatcaaggaagcccgctggcatcgtttcatg
gccaagcagcagcagatttcgaccaatctcctcaagaggaaagttggtaagcgcctgccg
gtcatcattgatgaagcaaacggcacaatcggcaaaggccgtacgcgctacgacgctccg
gaaatcgacggcagcgttcacatccagtcgcgccgcccgctacgcgtcggcgacatcgta
acggtgaagatcgaggcgagcgacgcttacgatctgcatggtatcgcggtctga
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