Ochrobactrum sp. MT180101: HGK82_23995
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Entry
HGK82_23995 CDS
T07147
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ocr
Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocr03400
]
HGK82_23995
Enzymes [BR:
ocr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HGK82_23995
DNA repair and recombination proteins [BR:
ocr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HGK82_23995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOD67002
LinkDB
All DBs
Position
unnamed1:206792..210001
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AA seq
1069 aa
AA seq
DB search
MAHPKLDRDLVIVPAGAGAGKTHRIKTQLSDWVKSKTVRPERILAVTFTEAAASELRERI
RSGLLADGLVSEAMAVERAYVSTIHGLGIRILTEHALAAGSSPQPRHLGDAERDLLIRQA
LAHSKALDPIKQEPERYGYSANWQRGESVEDSLRARVLAMIDLLRGLGEIGRDRKLIEPA
LARLDAIYGPTLADPVSARDALLKAIELMLTAFPEGGMATVTSKGPREALENNLALFQRV
SKKTNLLESDWQVWQDLRGLWMSNSRTKTPDRYDELALAIIAHADALPTHPGPLEDAKKH
LRCLITCAQEVMQAYEERKKALGLIDFADMITGAEALLRKNPEVRQAVLGEIDCVIIDEF
QDTNPVQFALLWQLGANVPRTLLVGDVKQSIMGFQGADPRLSQALAKSNPASTQPLDRNW
RSTPAVMKFVNAMGAGLFSEDYNPLAPIRDPVDGIALEILDLHKSRAVRTASKPQEHVAE
RIACLLNSAETITDRHTKSARPARPSDIALLVCRHSTATRYADELRKRGVPVRIAENGWL
TSLSVQAAIAALSYAANPQDIHAALLLRTLGPDPISLQDALSAQLNGELAEDGVLERLRE
VSDSLLRLSASAAVNLVVDTANIRPWAASQRDAHQARADLLRLEAEAIEFEKAHRDLKAA
SGFHGETIKVFLGWLTARAGERDFDRRPDPSANTAEAVEIVTWHASKGREWPITIVAEFD
NSILERPGTTSVSFEALDQIDDIASVLASAKLIHTPSFVAPEAQKLFIDDRRSDFEANAK
NLLYVALTRARDRLILEWPSFLKDREEDAPEASCLFHVFKDNCSPVLTNNALVLNGTECE
VALKQMADIAGFTEFKNGPDLHSIQLGRTDRLASAQLTPWRVQPSSAGSVGKKPVSRTIQ
IGTPWETAVNDALRGSALHLALHGQLIRQDLQSELAAATGLNDETLALVANRAAVLKAWL
DDAGYSEIHCEIPVLYETEAGTLINGTIDLLAVGSKGSILIDHKSGGSGDGLGPYWPQLA
AYADLVAKLFPAHPLQGIGIFWVDHGSLELVEQPANVVLAEPRGNSALA
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcacatccaaaattggatcgagaccttgtcattgttccagcaggtgctggtgcggga
aaaacacatcgtatcaaaacgcagctatctgactgggtaaaatcgaagactgtccgacct
gaacgcattcttgcagtaacttttacggaagcagcagcaagtgaactacgtgagcgaatt
cgctcaggtcttctggccgatggattagtgtctgaagccatggcagttgaacgcgcctat
gtgtccacaatccacggcttaggcatacgtattctaaccgagcatgcccttgcggcaggc
tcttcaccgcagccacgtcatttgggtgatgcagaacgtgatcttctgatccgacaagct
cttgcacattccaaggcgctggatcccatcaaacaagagcccgagcgttacggctattcc
gcaaattggcagagaggcgagagcgtcgaagacagtttacgtgcgcgtgtccttgccatg
atcgaccttttgcgcggattaggcgaaattggcagggatcgaaagctaatagagcctgca
ctggcaagattggacgcaatctatggtccaacgctggccgatcctgtatctgcacgtgat
gcattgttaaaagccattgagttgatgcttaccgcctttcctgagggaggtatggcgact
gtcacgtccaaaggccctcgagaggcgctcgagaacaatctcgcactttttcagcgggtc
agtaaaaagaccaatttgctagaaagcgactggcaagtttggcaggatcttcgcgggtta
tggatgtccaacagccggaccaaaacgcctgatcgatacgatgaacttgctcttgccatt
attgcgcacgcagatgctttgccaacgcatcccggcccactggaagatgcaaagaagcat
ttacgttgtctcatcacctgcgcgcaagaagtgatgcaggcctatgaagaacgcaagaaa
gcgctcggactcattgacttcgccgatatgatcacaggtgctgaagctttattgcgcaag
aacccggaagttcgccaggcagtactgggtgaaattgactgcgtgatcatcgatgagttt
caggatactaaccccgtacagtttgcgcttctatggcaattgggtgcgaatgtaccgcgc
accctactcgtaggcgatgtcaagcagtcgatcatggggtttcagggagcggatccacga
ctgtcccaggctttagcaaaatccaatcctgcatcgacacagccccttgatcgaaactgg
cgctcgacacctgcggtaatgaaatttgtcaatgctatgggtgcaggattatttagcgaa
gactataatccattggcccctatccgtgatccagttgacggcatcgcgctggaaatcttg
gatcttcataaaagccgagccgtgcgtacagcctcgaaaccacaagaacatgttgccgaa
cgcattgcttgccttttgaatagtgctgagacaatcacggaccggcatacgaaatcggca
aggccggcgcggccgtcggatatagctttgttggtatgccgacattcaacagccacgcgt
tacgctgacgaattgcgtaagcgcggcgtgcctgttcgcattgctgagaatggttggctt
actagtttgagtgttcaggcagcaattgccgcattaagttatgctgcaaacccgcaggat
attcatgcagcacttcttttacggacgctcgggcctgatccaatatctttgcaggatgca
ctgagtgcccagcttaatggagaattggctgaggacggcgttttagaacggctaagggaa
gttagtgacagtctattgagactttcagcttctgcggcagtcaatcttgttgttgatact
gcaaatatccgtccctgggcagcatcgcagcgcgatgcccatcaggctcgagcagacttg
ttacgtttggaagcggaggcgatcgagtttgaaaaagctcatcgtgatctgaaagctgct
tctggctttcacggcgaaaccattaaggtcttccttggctggttaactgcacgcgccggc
gaacgcgattttgatcgtcgacctgacccgtccgcaaacacagccgaagcggtagaaatc
gttacctggcacgcctcaaaggggcgagagtggccaattacgattgtcgcagagtttgat
aattcaattctggaacgccctggaacaacgtcggtcagctttgaagcacttgatcaaatt
gatgacattgcaagcgttctcgcatctgcaaaactcattcacacgccaagcttcgtcgca
ccggaagcacaaaagctgttcattgacgatcggcgttcagattttgaggcgaatgctaaa
aaccttctatacgtagccctaacccgtgcacgggatcggttaatactggaatggccatcg
tttctgaaagaccgcgaagaggatgccccagaagccagctgtttgtttcacgtattcaag
gataattgcagccctgttttgacgaataatgctctggttctaaatggtacagaatgcgaa
gttgctctcaaacagatggcagatattgctggttttacggagtttaaaaacggaccagat
ctccattccatccagttaggaagaacagaccgcctagcatccgcgcaactcacaccttgg
agagtgcagccgtcatctgcaggttcggtcggcaaaaagccagtcagccgcactattcaa
attggcacgccatgggaaactgctgttaacgacgccctccgcggttcagcacttcatctc
gccttacacggccaattgataagacaggacctacaatccgaactagctgctgcaacaggc
ctgaatgatgaaacgctcgctctggtcgcaaatcgcgctgcagtcctgaaagcctggctt
gatgatgcaggctattcggagattcactgtgaaatcccggtattgtatgaaacggaagcc
ggtacactgatcaatggaacgatcgatcttctagcagttggctcgaagggcagtattctt
atcgaccataaatcggggggatccggtgatggtttggggccttactggccgcagctcgca
gcatatgctgatctcgtcgcgaagctgtttcccgcacatccgctgcagggcatcggaatt
ttttgggttgatcatggatcactcgagttggttgaacagccagcaaatgttgtactcgca
gagccgagaggcaattccgctcttgcatga
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