Ochrobactrum sp. MT180101: HGK82_24330
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Entry
HGK82_24330 CDS
T07147
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HGK82_24330
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QOD67164
LinkDB
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Position
unnamed2:35803..37467
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AA seq
554 aa
AA seq
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MSQARFAWAAFKNMMRAAARDPLWAFLSLLAAPFRIWQTLLRVLFILIVALFVVGFGGRF
FLEQMGFGPGSIPFIALDLVTMLVLAAITFRLVTNPLIIHFGDMDGETHGSARFATNKEV
APLTRADTGLLIGRDPKSKRPLRYDGPAHLLTMAPTRTGKGVGTIIPNLLTADRSVICID
PKGENAKIAGRARQQFGPVHVLDPFGVTGQPSAAFNPLDQLDPAGLDVAEDASTLADALV
FDEPGMAGEAHWNEEAKALVAGLILHIAASEPRDRRNLAALREALTLAPEAFAALLKDMQ
ASTAASGLIARAANRHLGKSDREAAGVLSAAQRHTHFLDSPRMVAVLGRSDFGFADLKRR
NVSVFLVLPPDRLATYSRWLRLLVSQSLIDMARDPAKPAAPVLYLLDEFAALGHLAPVER
AMGLMAGYGVQLWPILQDVHQLRATYGQRAGTFLSNAGVLQVFGVNDHDSARLVSDLLGQ
ETVVFQTMSRALDSDKSGISYGEQHTARPLLTPDEVRNLPQHVELLFLAGQRPIVAGKLA
YYADSEFRGLYDAP
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggcgaggtttgcatgggctgcgttcaagaacatgatgcgcgccgccgcgcgt
gatccgctatgggcgttcctctccctgctcgccgcaccctttcgcatttggcaaacgctg
ctccgcgttctgttcatcctcatcgtcgcgcttttcgtcgtcggcttcggcggccggttc
ttcctcgaacaaatgggcttcggccccggctcgattccctttatcgcgctcgatctcgtc
acgatgctggtgctggccgcgatcaccttccggctcgtcaccaatccgctgattatccat
ttcggggatatggacggcgaaacccacggctcggcccgcttcgccaccaacaaggaagtg
gctcccctcacccgcgccgataccggcctgctgatcggccgcgatccaaaatcaaagcgg
ccgctgcgctatgacggcccggcccatctgctgaccatggcaccgacgcgcaccggcaag
ggcgtgggaaccatcatccccaacctgctcaccgccgaccgctccgtgatctgcatcgac
ccaaaaggcgaaaatgccaaaatcgccggccgcgcccgccagcaattcggcccggtccat
gtcctcgaccccttcggtgtcaccggccagccctcggccgccttcaatcctctcgaccag
ctcgacccggccggcctcgatgtcgcggaagatgcaagcaccttggccgacgccctcgtg
ttcgatgaaccgggcatggccggcgaagcgcattggaacgaggaagccaaggcgctcgtt
gccggcctgatcctccacattgccgccagcgagccgcgcgacaggcgaaacctcgccgcc
ctgcgcgaagccctcaccctcgcccctgaagccttcgccgcgctcctgaaggacatgcag
gcgtcaacggccgcctccggcctgatcgcccgcgccgcaaaccgccacctcggtaaatcc
gaccgagaggccgccggcgtcctctcggccgcgcagcgccatacccattttctcgacagc
ccgcgcatggtcgccgttctcggccgatccgatttcggctttgccgatctcaagcgccgc
aacgtctcggtgttcctcgtcctgccgcccgatcggctcgccacctattcccgctggctg
cgcctgctcgtctcgcaaagcctgatcgacatggcccgcgatcccgccaagccggccgcc
ccggtcctctatctactggatgagttcgccgccctcggccatctggcccccgtcgagcgc
gccatgggcctcatggccggctacggcgtccagctctggccgatcctgcaagacgttcac
cagctccgcgccacctatgggcaacgcgccggcaccttcctgtcaaatgccggcgtccta
caagtgttcggcgtcaacgatcacgacagcgcccggcttgtctccgatctgctcgggcag
gaaaccgttgtgttccagactatgagccgggcgctcgattccgacaaatccggcatttcc
tacggcgagcaacacacggcccgcccgctgctgacccccgatgaagtccgcaacctgccg
cagcatgtcgaattgctgttcctcgccgggcaacggccgatcgtcgccggcaagctcgcc
tattatgccgattccgagttccgggggctgtatgacgctccctga
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