KEGG   Ochrobactrum sp. MT180101: HGK82_24460
Entry
HGK82_24460       CDS       T07147                                 
Name
(GenBank) VirB4 family type IV secretion/conjugal transfer ATPase
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
ocr  Ochrobactrum sp. MT180101
Pathway
ocr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ocr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HGK82_24460
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ocr02044]
    HGK82_24460
Enzymes [BR:ocr01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HGK82_24460
Secretion system [BR:ocr02044]
 Type IV secretion system
  Trb secretion system protein
   HGK82_24460
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG ABC_tran DUF87 AAA_22 AAA_29 AAA_10 AAA_23 DEAD ATPase_2 AAA_16 nSTAND3 FtsK_SpoIIIE CbiA ATG17_like AAA MC4 T2SSE TrwB_AAD_bind AAA_30 Ribosomal_L13e
Other DBs
NCBI-ProteinID: QOD67244
LinkDB
Position
unnamed3:complement(10508..12943)
AA seq 811 aa
MVALRSFRPSAPSFADLVPYAGLVDNGIILLKDGSLMAGWYFAGPDSESATDFERNELSR
QINTILSRLGSGWMIQVEAVRIPTTDYPSAERSHFPDTVTRMIDDERRKHFEQERGHFES
RHALVLTYRPPERRRSGVTRYIYSDTESRTATYADTVLDSFRRSIREIEQYLGNVISIER
MRTREVPERGGTRIARYDELFQFIRFCITGENHPVRLPEIPMYLDWLATAELEHGLTPKV
ENRLLSVIAIDGLPAESWPGILNSLDLLPLTYRWSSRFIFLDAEEAKQRLERTRKKWQQK
VRPFFDQLFQTQSRSVDQDAMAMVAETEDAIAEASSQLVAYGYYTPVIILFDESREKLAD
KAESVRRLIQAEGFGARIETLNATDAFLGSLPGNWYCNIREPLINTRNLADLIPLNSVWS
GSPLAPCPFYPPDAPPLTQVASGSSPFRLNLHVDDVGHTLIFGPTGSGKSTLLALIAAQF
RRYKGAQVFAFDKGNSILPLTLAVDGNHYEIGGEAGEGARLAFCPLSDLSTETDRAWASE
WIETLVSLQGVTVTPDHRNAISRQIGLMAGAPGRSLSDFVSGVQMREIKDALHHYTVDGP
MGQLLDAEQDSLTLGQFQCFEIEQLMNMGERNLVPVLTYLFRRIEKRLTGAPSLIILDEA
WLMLGHPVFRDKIREWLKVLRKANCAVVLATQSISDAERSGIIDVLKESCPTKICLPNGA
ARESGTREFYERIGFNPRQIEIVAAAIPKREYYVTSPDGRRLFDMALGPLTLSFVGASGK
ADLARIRELLSTYGKDWPTQWLNERGINRYA
NT seq 2436 nt   +upstreamnt  +downstreamnt
atggtcgctttgcgttcctttcgcccgtctgcaccctcgtttgccgatctcgtgccctat
gccggactggtcgacaacgggatcattcttctcaaggacggaagtctgatggcgggatgg
tattttgccggccctgactccgagagcgccacggatttcgagcgcaacgagctgtcccgt
cagatcaatacgatcctttcacggctaggttccggctggatgatccaggtcgaggctgtg
cgcatcccaacgactgactatccttctgcggaacgcagtcatttccccgatactgtcact
cgcatgatcgatgatgagcggcgcaagcacttcgaacaagagcgcgggcatttcgagagc
cggcatgcgctcgtcctgacatatcgccctcccgagcgccggcgatctggcgtcacgcgt
tatatctactcggacactgagagccggacggcgacctatgccgacacggtgctcgacagt
ttcaggcgctccatccgagagattgagcagtacctcggcaacgtcatctccattgagcgt
atgcggactcgtgaggtgccggaacgcggtggcacccgcattgcccgctatgatgagctg
ttccagttcatccggttctgcatcaccggtgaaaatcacccggtacgcctacctgaaatt
cccatgtacttggattggctggcgaccgcggagctagagcacggcctcaccccgaaggtc
gaaaaccggttactcagcgtgatagcgatcgacggtttgccggccgaaagctggccaggc
atcctcaacagcctcgatctcctgccgctcacttatcgctggtcgtcgcgcttcatcttt
ctggatgctgaggaagccaaacagcggttggagcgcacgcgcaagaaatggcaacagaag
gtgcggccgttcttcgaccaactcttccagacgcaaagccgatcggttgaccaggacgca
atggcgatggtcgctgagactgaagacgcgatcgccgaggcttcttcgcagctggtcgct
tatggctactacacgccggtcatcattctattcgacgagagcagagaaaagctcgccgat
aaagctgagtcggttcgaaggttgatccaggctgagggatttggcgcgcggatcgagacg
ttgaatgcgacggacgcattcctcgggagcctgccaggcaactggtactgcaacatccgg
gaaccgctgataaacacccgcaacctcgcggacctcatccccctcaattccgtctggtcg
ggcagtccacttgcgccctgcccgttctatccacccgacgcgccgccactgacgcaggtg
gcttccggatcgtcacccttccgactgaaccttcatgtggatgatgtcgggcatacgctt
attttcggaccaaccggttccggcaagtcaacgcttctcgcgctcatcgcagcgcaattt
cgccggtataagggtgcgcaggttttcgccttcgacaaaggcaactctattctgccgctg
acgctggccgttgatggtaatcattacgaaatcggcggcgaggcaggggagggggctagg
cttgccttttgccctctctccgacctctcgaccgagaccgaccgcgcctgggcttccgag
tggatcgaaacactcgtctccctgcagggtgtcacggtcaccccggaccaccgaaacgcc
atatctcggcagatcggtttgatggcgggggcgccaggccggtcgctgtcggattttgtg
agtggcgtgcagatgcgggagatcaaggacgcgttgcaccactacactgttgacggcccc
atgggccagcttctcgacgccgaacaggattcgctgaccctcggtcaattccagtgcttc
gagatcgagcaactgatgaatatgggcgagcgaaatctcgtccccgtgctgacgtatctg
tttcgcaggatcgaaaagcggctcacgggggcaccaagcctcatcattctcgatgaggct
tggctgatgctcggccacccggttttccgcgacaagatccgcgagtggctgaaggtgctg
cgaaaggcaaactgcgccgtcgtcctcgccacgcagtcaatttcggacgcagagcgttcg
ggcatcatcgatgtcctgaaggaatcctgcccaaccaagatctgcctcccgaatggggct
gcccgcgagtccgggacacgagaattctatgagcgcatcggctttaatcctcgccaaatc
gaaatcgtcgcagccgctattccaaagcgggaatattacgtgacgtcgccggacggacgc
cgccttttcgatatggcgctggggccgctcaccctctccttcgtcggtgcttccggcaaa
gccgacctcgctcggatccgggaacttctctcaacttacggcaaagactggccgacccaa
tggctcaatgaaagagggatcaatcgctatgcttga

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