Ochrobactrum sp. MT180101: HGK82_24635
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Entry
HGK82_24635 CDS
T07147
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HGK82_24635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocr02000
]
HGK82_24635
Transporters [BR:
ocr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HGK82_24635
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
AAA_22
ABC_ATPase
AAA_29
nSTAND3
AAA
AAA_16
nSTAND1
Rad17
RsgA_GTPase
AAA_28
Mg_chelatase
AAA_18
AAA_25
TsaE
IstB_IS21
AAA_30
NACHT
PhoH
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QOD67275
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All DBs
Position
unnamed3:complement(47826..48875)
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AA seq
349 aa
AA seq
DB search
MTSLEINKICKHYGAVQALHSVSLSIQKGEFVTLLGPSGSGKTTLLKILAGFEPVTSGSV
TMDGRDITALSPEKRNFGLVFQGYALFPHLSVYDNIAYPLRVRRQSKAVIDERVRGLLDL
VQLRPFANRRPQELSGGQQQRVALARALVFKPDVLLLDEPMSALDKKLRHDLQEELRDIH
KSLGTTFINVTHDQEEAMHMSDRIAIMDHGSIQQYDTAHTLYRRPVSRFVAEFVGKSNVF
QGEVRGSGTHASFHCANFEMPLSDATAGGPTMMIRPEDVELTHTAIEDGRVILSARVVSS
TYSGDRALYTLTLNDGSSFIAYGSARSGTYPNGAEIFVSFASKDAIALA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgcttgaaatcaacaagatctgcaaacattacggtgccgtgcaagccctgcac
agcgtgtcactgtcaattcagaagggcgaattcgtcaccctgcttggcccttcgggatcg
ggcaagaccacgcttctgaagatcctcgccgggttcgagccggtaacctcgggttcggtg
acgatggatgggcgcgatatcaccgcgctgtcgccggaaaagcgcaacttcggcctggtc
tttcagggctacgcgctgttcccgcatttaagcgtctatgacaatatcgcttatccgctg
cgggtgcggcggcaatccaaggctgtgattgatgagcgggtgcgcggcctgctggatctg
gtgcagctgcgacccttcgccaaccgccgcccgcaagagttgtcgggcgggcagcaacag
cgcgtggcgctggcccgcgcgctggtcttcaaacccgatgttctgctgctcgatgagccg
atgtcagcgctggacaagaagctgcgtcacgatctgcaggaagagctgcgcgacattcac
aaaagccttggcaccaccttcatcaacgtcacccatgaccaggaagaagcgatgcatatg
tcggaccgcatcgcgatcatggatcatggcagcatccagcaatatgacacggcgcatacg
ctctaccggcgacccgtctcgcgcttcgtggcggaatttgtcggcaaatccaacgtcttc
caaggcgaggtccgcggatccggcacacacgccagcttccactgcgcaaatttcgagatg
ccattgtccgatgccacagccggcgggccgaccatgatgatccgccctgaagatgtcgag
cttacccacacggccatcgaggacgggcgcgtcatcctgtccgcccgggtcgtgagctcg
acctattccggcgaccgggcgctttacacgctgacgctgaacgacggctccagcttcatc
gcctacggctcggcgcgctccgggacttatcccaatggtgccgagatcttcgtcagcttt
gcgtcgaaagacgccatcgccctagcctaa
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