Oceanotoga sp. DSM 15011: OF820_00100
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Entry
OF820_00100 CDS
T08543
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
Organism
ocs
Oceanotoga sp. DSM 15011
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
AAA_27
ABC_tran
DUF1664
Motif
Other DBs
NCBI-ProteinID:
UYP00097
LinkDB
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Position
complement(22539..26066)
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AA seq
1175 aa
AA seq
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MKLKTLEIEGFKSFAKKTSIDINKNLIAIVGPNGSGKSNVVDAIRWMLGEQSNKQMRIQD
REDVVFSGTNKHKPSKFAMVSLIIEIDEKNIKLTKYFDKNKGNIYSINDKNSTLKDILNL
FSNGIGKQFYSIISQGQVSDIVNSSSEQLKNIIIDASEIKDFLDKKNYSLKLLEKTQENL
DRINDILYMTEKRLKSLSIRAGRAKKYLENKQQLQNIGKIYFGASKIYKMNTIDTLEKEK
HNISLDLKKLYSEQFDIERKYRSLKEEIDNVEDEINKNTDLIESYRSRTSSLEKEKERLN
ESINELNSEILSIDWKINNFDERLKNEEQKLEEVSTLEKTYNIDFERIYNEYEEILSKKN
DLENTVSQKQKLYNEKKFFYNTLIDEINKNNTLIEQKNNSIIGKKERLEFLKTEFENKSN
KIESIEFSLKKIRKKLTIKSEEEKSLINAIKEKITALKDLNSEYNVLKNDLENRKSERIQ
LKNKLENLNLQISEYAGYSSVIKEFFKEFKDDDNVVDVVANIVEINEQYEEAISSSAGYK
LQNIVIKSSSYSKFYIDFLKKLRMGKITFLPLDLLKTKSYLNKKFLNEPGVIDYLINIIK
FDNKYQKIMEYVFSNTILVNDIESAINLSKVGFNSNIVTINGETVSGQGSISAGKNKYDY
SSSILKRKRELQETIFLLEENKENIIYSESEIKKISEKIIKLNDIVREEKEKLNDLISEK
NIHNNEFKSLNEELKNLISSNKNISERIYNYEDEIEILKEDIINFQKINTENKNKTLNLK
KEIETLEIENSDFNLKITELKQTLLEKKYQKDSLDEKINYYNQKKVESLKNIDHIKSEKI
DLNEKYSNIKNTLESKNNDIKRVEIEYDSLNTEITKIFDIMKSSRSGKFEKAEDLEILET
EKNNLKELINEKKERNNSINYEIENVKHEIEFLTEKANNLDIEASEFELVELDEIELKSY
SNKIKEIEDYLKNLGSVDLTVLDEFNEVENEFNTQNMEKEDIVESYNKLKNSINDLDSNA
EKIYGDFFEKLNEKFKIYISQLFINGYGELRLVGEGKIFEQGIQISVKKSGRNFQKLSLF
SGGEKALIAIAFLFSLMDLNPSPFYILDEIDAPLDDINADKIASLIKNNAHKSQFMIITH
NKLMMEIAEIFHGITMKNGVTYVVPVDFKEFSNIS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaaacccttgaaatagaaggttttaaaagttttgcaaaaaaaacctccatt
gatatcaataaaaatctcatagcaatagtaggtcctaatggttctggaaaatcaaatgtt
gttgatgctataagatggatgttgggtgaacagtctaataaacaaatgagaattcaagac
agagaagatgttgttttttctggaactaataaacataaaccttcgaaatttgctatggtt
agtctcataattgaaattgatgaaaaaaacataaaattgactaaatactttgataagaat
aaaggaaatatatattctattaatgataaaaactctactttaaaagatattttaaatctt
ttttctaatggaataggaaaacaattctattctataatttctcaaggacaagtttcagat
atagtaaattcttcttctgaacaattaaaaaatatcattattgatgcttcagaaataaaa
gatttcttagataaaaaaaattattctttaaaattattagaaaaaacacaagaaaattta
gatagaataaatgatattctttatatgacagaaaaaagattaaagtctttatctataaga
gcaggaagagcaaaaaaatatcttgaaaataagcaacaattacaaaatattggaaaaatt
tattttggtgcctcaaaaatatataaaatgaatacgattgatactttagaaaaagaaaag
cataatataagtttagatttaaaaaaactttattctgaacaatttgatattgaaagaaag
tatagatctttgaaagaagaaattgataatgttgaagatgaaataaataaaaatactgat
ttaatcgaaagttatagaagtagaacttcttctcttgaaaaagaaaaagaaagattaaat
gaatctataaatgaattaaactctgaaatactttcaatagattggaaaatcaataatttt
gatgaaagattaaaaaacgaagaacaaaaattagaagaagtttcaactttagaaaaaact
tataatatagattttgaaagaatatataatgaatatgaagaaattctttcaaaaaaaaat
gatttagaaaatacggtatctcaaaagcaaaaattatataatgaaaagaaattcttttat
aacacattaatagatgaaataaataaaaataatactttaatcgaacaaaaaaataattca
attatagggaaaaaagagagattggaatttttaaaaacagagtttgaaaataaatcgaat
aaaatagaatcaattgaattttctctaaaaaaaataagaaaaaaattgaccattaaatca
gaagaagaaaaaagtctaataaatgccataaaagaaaaaattactgccttaaaagactta
aattctgaatataatgtattaaaaaatgatttggaaaatagaaaaagtgaaagaattcaa
ttaaaaaataaacttgaaaacttaaaccttcaaatttctgaatatgctggatattcgtca
gttataaaagaattttttaaagaatttaaagatgatgataatgttgtagatgtagtagca
aatattgtggaaataaatgaacaatatgaagaagctatatcttcttcagctggatacaaa
ctccaaaatatagtaattaaaagttcttcttactctaaattctatattgattttttaaaa
aaattgagaatgggtaaaataacttttttacctttagatcttttaaagactaaatcatat
ttaaataaaaaatttctgaatgaacctggtgttatagactatttaataaatataataaaa
tttgataataaatatcaaaaaataatggaatatgttttttcaaacacaatacttgttaat
gatattgaaagtgccataaatctatcaaaagttggatttaatagcaatatagttacaatt
aatggagaaactgtaagtggtcaaggatctataagtgctggtaaaaacaaatatgattat
tcttcttctatcttgaaaagaaaaagagaattacaagaaactattttcttattagaagaa
aataaagaaaatattatatattctgaatctgaaataaagaaaataagtgaaaaaataatt
aagttaaatgatattgtaagagaggaaaaggaaaaacttaatgatctaatttctgaaaaa
aatatacataataatgaatttaaaagtttgaatgaagaattgaaaaacttaatttcttca
aataaaaatatttctgaaagaatttataattatgaagatgaaattgaaattcttaaagaa
gatattataaattttcaaaaaataaataccgaaaataaaaataaaacattgaatttaaaa
aaagaaattgaaactttagaaattgaaaatagtgattttaaccttaaaattactgaatta
aaacaaacattattagaaaagaaatatcaaaaagattctttggatgaaaaaataaattat
tataatcagaaaaaagtagaatcattaaaaaatatagatcatataaaaagtgaaaaaatt
gatttaaatgaaaaatattctaatattaaaaatacccttgaatctaaaaataatgatata
aaaagagtagaaattgaatacgatagtttaaatactgaaattacaaaaatatttgatata
atgaaatcttcaagaagcggtaaattcgaaaaagctgaagatcttgaaatactcgaaaca
gaaaaaaataacttaaaagaattaataaatgaaaaaaaagaaagaaataatagtataaac
tatgaaatagaaaatgttaaacatgaaattgaatttttgactgaaaaagcaaataattta
gatatagaagcatccgaatttgagcttgtagaactcgatgaaattgaattaaaatcttat
tctaataaaataaaagaaatagaagattatctaaaaaatcttggttctgttgatttaacc
gtattagatgaatttaatgaagtcgaaaatgaattcaatactcaaaatatggaaaaagaa
gatatagtagaatcttataataaattaaaaaattctataaatgatttagattcaaatgca
gaaaaaatttatggagacttttttgaaaaattaaatgaaaaatttaaaatatatatatct
caactatttattaatggttatggagaattgagacttgtaggtgaaggtaaaatatttgaa
caagggatacaaatttctgtgaaaaaatctggtagaaattttcaaaaattatctcttttt
tctggtggtgaaaaagctttgatagcgatagcttttttattttccttgatggatttaaat
ccaagtcctttctatatattagatgaaattgatgctccattagatgatataaatgcagat
aaaatagcttcattaataaaaaataatgcccataaatctcaatttatgataataactcat
aataaacttatgatggaaatagctgaaatttttcatggtataaccatgaaaaatggggtt
acatatgtagttccagttgattttaaagaattttcaaatatatcttaa
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