Oceanotoga sp. DSM 15011: OF820_01950
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Entry
OF820_01950 CDS
T08543
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ocs
Oceanotoga sp. DSM 15011
Pathway
ocs03030
DNA replication
ocs03430
Mismatch repair
ocs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OF820_01950 (dnaX)
03430 Mismatch repair
OF820_01950 (dnaX)
03440 Homologous recombination
OF820_01950 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocs03032
]
OF820_01950 (dnaX)
03400 DNA repair and recombination proteins [BR:
ocs03400
]
OF820_01950 (dnaX)
Enzymes [BR:
ocs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OF820_01950 (dnaX)
DNA replication proteins [BR:
ocs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OF820_01950 (dnaX)
DNA repair and recombination proteins [BR:
ocs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OF820_01950 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RCF1-5-like_lid
AAA_5
RuvB_N
AAA_22
AAA_19
TIP49
AAA_30
AAA_7
Rad17
AAA_18
AAA_14
Mg_chelatase
AAA_assoc_2
PIF1
DNA_pol3_gamma3
PTPlike_phytase
Sigma54_activat
TsaE
NPHP3_N
ABC_tran
Radical_SAM_N
Motif
Other DBs
NCBI-ProteinID:
UYP00455
LinkDB
All DBs
Position
390946..392316
Genome browser
AA seq
456 aa
AA seq
DB search
MNESLYRKYRPMTFEDIAGQNHIKKYFKNASKKNNISHAYIFNGPRGTGKTTIARIISKL
MNCKNPINNNPCNTCENCKSINQNAFMDVMELDAASNRGIDEIRQIRDSANYRPVAGKYK
IYIIDEFHMLTREAFNALLKTLEEPPKHVIFILATTNMEKVPETIISRSQVINFKNISNI
DIEERLKYICKMENIETEDSVLQIIAKKAKGGMRDAISLLEQVIKFSSDNILKKEELYDV
LGIYDEKYIETYIYDLINGNTEKILKYNKEIYDMGKEPEILIEEGIESLFDKIKKEGFQN
KYIFTLNELNEILKELKNNEDKKMVFNIKTTILSYINSKDTQDKKILENLEKDFYGQSET
DEEDIIKNIMDFYTENNKKTNLALYYSIKNSEKIIQNNKIIFKFNETQNLEYQFIKKYLQ
DLKINISSITKNNLEIDIQYLNKIEKSEEDIKNSLF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagagtttgtatagaaaatatagacctatgacttttgaagatattgcaggtcaa
aatcatataaaaaaatattttaaaaatgcatctaagaaaaataatatatctcatgcatat
atatttaatggaccgagaggtactggaaaaacaactatagcaagaataatatctaaacta
atgaattgtaaaaatccaataaataataatccttgtaatacttgtgaaaattgtaaatct
ataaatcaaaatgcttttatggatgttatggaattagatgctgcatcaaatagaggaatt
gatgaaataagacagataagagattctgcaaattatagacctgtagctggcaaatataaa
atatatataatagatgaatttcatatgttaacgagagaagcatttaatgcacttttaaaa
actttagaagaaccaccaaaacatgttatatttatacttgcgactactaatatggaaaaa
gtccctgaaacaataatatccagatcacaagtcataaattttaaaaatatttcaaatata
gatatagaagaaagattaaaatatatatgtaaaatggaaaatatagaaacagaagattca
gttttacaaataattgcaaaaaaagctaaaggtggaatgagagatgctatatctctttta
gaacaagttataaagttttcatcagataatatattaaaaaaagaagaattatatgatgta
cttggaatatatgatgaaaaatatatagagacttatatttatgatttaataaatgggaat
acagaaaaaatattaaaatataataaagaaatatatgatatgggaaaagaacctgaaatt
cttatagaagaaggaatagaaagtttatttgataaaataaaaaaagaaggatttcaaaat
aaatacatatttacattaaatgaattgaatgaaatattaaaagaactaaaaaataatgaa
gataaaaaaatggtatttaatatcaaaacaacgatactatcttatataaattcaaaagat
acacaagataaaaaaattttagaaaatcttgagaaagatttttatggtcaatcggaaaca
gacgaagaagacataataaaaaatattatggatttttatacggaaaacaataagaaaact
aatttggctttatattatagtataaaaaattctgaaaaaataatacaaaataataaaata
atatttaaatttaatgagacacaaaatttagaatatcaatttataaaaaaatatttacaa
gatttaaaaataaatattagttctataacaaaaaataatttagaaattgatatacaatat
ttaaataaaatagaaaaaagtgaagaagatataaaaaattcattattttaa
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