Oceanotoga sp. DSM 15011: OF820_02010
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Entry
OF820_02010 CDS
T08543
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ocs
Oceanotoga sp. DSM 15011
Brite
KEGG Orthology (KO) [BR:
ocs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocs03032
]
OF820_02010
03036 Chromosome and associated proteins [BR:
ocs03036
]
OF820_02010
03400 DNA repair and recombination proteins [BR:
ocs03400
]
OF820_02010
DNA replication proteins [BR:
ocs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OF820_02010
Chromosome and associated proteins [BR:
ocs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OF820_02010
DNA repair and recombination proteins [BR:
ocs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OF820_02010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2530
Motif
Other DBs
NCBI-ProteinID:
UYP00467
LinkDB
All DBs
Position
404410..404682
Genome browser
AA seq
90 aa
AA seq
DB search
MNKKELVDALSEKASTTKKQAEVFVDSFVSVVSEELEKEGEVKLVGFGTFKVQQRAARKG
VNPQTGKQIKIPARKVPKFIAGKELKERVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaggaattagtagatgctttatcagaaaaagcttcaacaacaaaaaaacaa
gctgaggtatttgttgatagctttgtttcagtagtatctgaagaattagaaaaagaaggg
gaagttaagttagttggatttggtacatttaaagtacaacaaagagctgcaagaaaaggt
gtaaatcctcaaacaggtaagcagataaaaatacctgcaagaaaagtacctaaatttata
gctggaaaagaattaaaagagagagtaaaataa
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