KEGG   Oceanotoga sp. DSM 15011: OF820_02210
Entry
OF820_02210       CDS       T08543                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ocs  Oceanotoga sp. DSM 15011
Brite
KEGG Orthology (KO) [BR:ocs00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    OF820_02210 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocs03019]
    OF820_02210 (rnc)
   03009 Ribosome biogenesis [BR:ocs03009]
    OF820_02210 (rnc)
   03036 Chromosome and associated proteins [BR:ocs03036]
    OF820_02210 (rnc)
Enzymes [BR:ocs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     OF820_02210 (rnc)
Messenger RNA biogenesis [BR:ocs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     OF820_02210 (rnc)
Ribosome biogenesis [BR:ocs03009]
 Eukaryotic type
  90S particles
   RNase
    OF820_02210 (rnc)
 Prokaryotic type
  rRNA processing factors
   OF820_02210 (rnc)
Chromosome and associated proteins [BR:ocs03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     OF820_02210 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_MRPL44 DSRM_2 SIS_2 aRib GBD_ATRN
Other DBs
NCBI-ProteinID: UYP00506
LinkDB
Position
444721..445458
AA seq 245 aa
MKSEESFNLNKNEKNQVKNAIKYLNLPEIMDKKILFNALCHTSYVFEKENKGRKLNSNER
LEFLGDSVLELVISEFLYSNYSLTEGDMSKIRATVASELILSEVALSIGLNNFLFLGTGE
DKHGGRKKHSILADAFESLLASIYLSLGYEFTQNFIIKNLNEHIEKAVAGELFLDYKTKL
QEITQDVFKVLPDYEIIKAKGPSHIRYYKIGVKVDGKIYGIGEGHSKKIAEQIAAREACK
KIRKE
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaaaagtgaagaatcatttaatttaaacaaaaatgagaaaaatcaagttaaaaatgca
ataaaatatttaaatctaccagaaatcatggataaaaaaatattattcaatgctttatgc
catacttcatatgtatttgaaaaagaaaataaaggaagaaaattaaactctaatgaaaga
ttagaatttctcggagattcagttttggaactcgtaatctccgagttcctttattcaaat
tattcattaactgaaggagatatgtcaaaaataagagccacagttgcaagtgaattaata
ttatcagaagtagctttaagtataggattaaataattttttatttttaggaactggtgaa
gataaacatggtggaagaaaaaaacattcaatactagcagatgcttttgaatcattatta
gcttctatttacttatctttaggatacgaatttactcaaaattttataataaaaaatcta
aatgaacatatagaaaaagctgtagctggtgaattatttttagattataaaactaaatta
caagaaataactcaagatgtatttaaagttctacctgattatgaaataataaaagcaaaa
ggaccttcccatataagatattataaaattggtgttaaagttgatggaaaaatatatggc
attggagaaggccattcaaaaaaaatagctgaacaaattgctgcaagagaggcttgtaaa
aaaataagaaaggaataa

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