Oceanotoga sp. DSM 15011: OF820_02665
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Entry
OF820_02665 CDS
T08543
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ocs
Oceanotoga sp. DSM 15011
Brite
KEGG Orthology (KO) [BR:
ocs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocs03400
]
OF820_02665
DNA repair and recombination proteins [BR:
ocs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OF820_02665
Archaeal homologous recombinant proteins
OF820_02665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
BD-FAE
DNA_pol_E_B
MGDG_synth
RICTOR_M
Y1_Tnp
Motif
Other DBs
NCBI-ProteinID:
UYP00595
LinkDB
All DBs
Position
complement(545643..546773)
Genome browser
AA seq
376 aa
AA seq
DB search
MKIIHTADWHLGKIIYSNYMTQEQEYILEQFINYVEKNKPDVIIISGDIYDRSIPPSEAV
NLLNKVLSNIVIKNKIPTMIISGNHDSEERLEFLNGILSEMDLHIEGKIKKQIKKVIINK
NSKDKTNFYLLPYIEMQKVKDLYEIDFQTKNEAMKYIIKEMKIDTNEINILISHEYVAGG
IESDSERILSIGGTEYIDPQILKDFDYVALGHLHGPQKIKYEKIRYSGSLMKYSFSETNQ
KKGMNLIEINQKNDIKIKQINFKPKRDMKIIKGLFNEIIKMENTDDYLHIIIEDQEPIYE
AINKLRTKYPNVLSLEFPNLKTNNDIKTNKKNIKNISPNELFYYFYEEIKGKKINENQKT
YTNKLFEEILKERSEE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaagataatacatacagcagattggcatcttggtaaaataatatattcaaattatatg
actcaagaacaagaatatatattagaacaattcataaattatgtagaaaaaaacaaacct
gatgtaataataatatctggtgacatttatgatagatcaatacctccttcagaagctgta
aacttattaaacaaagttttatcaaacatagttataaaaaataaaataccgactatgata
atatctggaaatcatgatagcgaagaaagattagaatttctcaatggaatactttcagaa
atggacttacatatagaaggaaaaataaaaaaacaaataaaaaaagttataataaataaa
aattctaaagataaaacaaatttttatttattgccatatatagaaatgcaaaaagtaaaa
gatctatatgaaatagatttccaaacaaaaaatgaagctatgaaatatataataaaagaa
atgaaaattgatacaaatgaaataaatatattaatatcacatgaatatgttgctggagga
atagaaagcgattctgaaagaatattatcaataggaggaacagaatatattgatcctcaa
atattgaaagacttcgattatgttgcacttggacatttacatggaccgcaaaaaataaaa
tatgaaaaaataagatattcaggttcactcatgaaatattcattcagtgaaactaatcaa
aaaaaaggaatgaatttaatagaaataaatcaaaaaaatgatataaaaataaaacaaata
aacttcaaaccaaaaagagatatgaaaataataaaagggttattcaatgaaataataaaa
atggaaaatactgatgattatttacacataataatagaagatcaagaaccaatatatgaa
gcaataaacaaactgagaacaaaatatccaaacgtactatcattagaatttcctaatcta
aaaactaataatgatataaaaacaaataaaaaaaatatcaaaaatatatcaccaaatgaa
ttattctattatttttatgaagaaattaaagggaaaaaaataaatgaaaatcaaaaaaca
tatacaaataaactttttgaagaaatactaaaagaaagaagtgaagaataa
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