Oceanotoga sp. DSM 15011: OF820_02755
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Entry
OF820_02755 CDS
T08543
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ocs
Oceanotoga sp. DSM 15011
Pathway
ocs00300
Lysine biosynthesis
ocs00470
D-Amino acid metabolism
ocs01100
Metabolic pathways
ocs01110
Biosynthesis of secondary metabolites
ocs01120
Microbial metabolism in diverse environments
ocs01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ocs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OF820_02755 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
OF820_02755 (lysA)
Enzymes [BR:
ocs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
OF820_02755 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
UYP00613
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All DBs
Position
complement(562809..564035)
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AA seq
408 aa
AA seq
DB search
MKKIYNAIKQINKVEKTPYYIYSQEQIEENIKNLQEAFNWADFKEYFAVKATPNPHILKI
MKNNQCGVDCSGINEIKLAKMVDYKGQDIFFTSNNTTEEEYKYAIKNECIINIDDYKHIT
MIKKIKQKPETISMRITPLLKVGNGIIGNPEQSKFGNTPEQIKEGLKQIKQIGIKKIGLH
TMMVSNELEIETLLKVYKYIFDFVSQIKEDLKIELDFINLGGGIGYNYENREKQIDIQKL
GKKTQEIYSKSFKKFENTPKIYMESGRYITNNAGYLITKVINIKKTYKTYIGVDAGMQNL
MRPGMYGAYHEIEIINKDLEQRKENMQKYDIVGSLCENNDKFAIDRLLPKVQKEDLLIIK
DVGAHGFSMGFNYNAKLKSAEYLIEKDNIKKIRRKETFEDYIQTIMEV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatatataatgctataaaacaaataaataaagttgaaaaaactccatattat
atatactctcaagaacaaatagaagaaaatataaaaaatcttcaagaagcgtttaattgg
gcagatttcaaagaatattttgcagtaaaagctacacctaatcctcatatattaaaaata
atgaaaaataaccaatgtggtgttgattgtagtggaataaatgaaataaaacttgcaaaa
atggttgattataaaggtcaagatatattttttacttctaataatacaacagaagaagaa
tataaatatgcaataaaaaatgaatgcataataaatatagatgattataaacatataacc
atgataaaaaaaataaagcaaaaaccagaaacaataagcatgagaataaccccacttcta
aaagttggaaatggaataataggaaatcctgaacagtcaaaatttggcaatactccagaa
cagataaaagaaggtttaaaacaaataaaacaaattggaataaaaaaaattggattacat
acaatgatggtatcaaatgaattagaaatagaaactttgttaaaagtatacaaatatata
ttcgattttgtaagtcaaataaaagaagatttaaaaatagaattagattttataaattta
ggcggtggaattggatataactatgaaaatagagaaaaacaaatagatattcaaaagctt
ggtaaaaaaacgcaagaaatatattcaaaaagttttaaaaaatttgaaaatactccaaaa
atatatatggaaagtggaagatatataacaaataatgccggatatttaataactaaagta
ataaatataaaaaaaacatataaaacatatattggggtagatgccggaatgcaaaatctt
atgagacctggaatgtatggagcatatcatgaaatagaaataataaacaaagatttagaa
caaagaaaagagaatatgcaaaaatatgacatagttggatcattatgtgaaaacaatgat
aaatttgcaatagacagattattaccaaaagttcaaaaagaagatctattaataataaaa
gatgttggagcacatggtttttcaatgggatttaattacaatgctaaattaaaatcagca
gaatatctaatagaaaaagataatataaaaaaaataagaagaaaagaaacatttgaagac
tatatacaaactataatggaggtataa
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