Oceanotoga sp. DSM 15011: OF820_03465
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Entry
OF820_03465 CDS
T08543
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ocs
Oceanotoga sp. DSM 15011
Pathway
ocs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OF820_03465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocs03019
]
OF820_03465
03016 Transfer RNA biogenesis [BR:
ocs03016
]
OF820_03465
Enzymes [BR:
ocs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OF820_03465
Messenger RNA biogenesis [BR:
ocs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OF820_03465
Transfer RNA biogenesis [BR:
ocs03016
]
Prokaryotic type
tRNA degradation factors
OF820_03465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
Motif
Other DBs
NCBI-ProteinID:
UYP00746
LinkDB
All DBs
Position
complement(700944..703133)
Genome browser
AA seq
729 aa
AA seq
DB search
MKFWEKEIFGRKLRIENGKMAKQSHGSILLTFNESTILLTVNASETAKPGTDFLPLTVDF
KEKFYAIGKIPGGFVKREGRPSEEAILSSRLIDRPIRPLFPKDFHNEIQVISTVFSMLND
DSIETWSIAAASLALNISPIPFNGVVAGVRVGLIDGEYIAFPTQEQLSKSEIDIVVAGSK
EAITMVEGEAHEVSEEIMVEALNFSHKAIKEIISIQEEIISEFNIEKWEVEVPEYPEEFI
NDFKSLINKETLFEALMVEGKKNKDKKLKEFKDSVFEEFEELYLDKWTEEFYLEKKSYLK
ETYEEIFKKLMRRSIVDDNKRADGRKIDEIRPITCEIGVIPRVHGSALFTRGETQSLGIT
TLGAPMDVQMVDTIFSDEDKRFMLHYNFPPFSTGEVRPLRGPGRREIGHGHLAERSHKNL
IPSESEFPYTIRVVSEILESNGSSSMATVCSASLSMMDAGIPLKKHVAGVAMGLIFEEDK
NVVLTDILGIEDHLGDMDFKVTGTREGITAFQMDVKVDKVNEEIMREALDRAKIARLKIL
NLMYDAISEPRPELSPFVPKIKTITIPVNKIGDVIGPGGRIIKKINETYNTETSIDDEGI
VKVSGMAEDMVDKAIKYITGLVSEIEKGKVYEGKIKRVEKYGVFVEVLPGKSGLLHISNM
SKKPTELKIDDKINVEVISIESQSKFQLKEEGYEKPKRAPRPEKTSNDKNDSNNDEKKDK
DIEKENGGN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttgggaaaaagaaatattcggaagaaaacttagaatcgaaaatggaaaaatg
gctaaacaatcacatggttctatcttgttgacttttaacgaatctacaatattattaacc
gttaatgcatctgaaactgctaaaccaggaacagattttttacctttaacagtagatttt
aaagagaaattttatgcaataggaaaaattcctggtggattcgttaaaagagaaggaaga
ccatctgaagaagctattttatcttcaagacttatagatagacctataaggcctttattt
ccaaaggattttcataatgaaatacaggtaatatcaactgttttttctatgttaaatgat
gattctattgaaacttggagtatagcagcagcttctcttgctttgaatatatccccaata
ccttttaatggtgttgtagctggtgtaagagtaggattgattgatggagaatatatagct
tttccaactcaagaacaactttcaaaatcagaaatagacatagttgttgctggttcaaaa
gaagccattacaatggttgaaggagaagcacatgaagttagtgaagaaattatggttgaa
gcattgaatttttctcataaggctataaaagaaataatatctattcaagaagaaattata
tctgaatttaatatagaaaaatgggaagttgaagtgccagaatatcctgaagagtttata
aatgattttaaatctttaataaataaagaaactctttttgaagcgcttatggtagaaggt
aaaaaaaataaagacaaaaaactaaaagaattcaaggattcggtatttgaagagtttgaa
gaattatatcttgataaatggacagaagaattttatcttgaaaagaaaagttatttaaaa
gaaacttatgaagaaatatttaagaaactcatgagaagatctatagtagatgataataaa
agagccgatggaagaaagatagacgaaataaggcctattacatgtgaaataggagtcatt
ccaagagttcacggttctgcactctttactagaggagagactcaatctttaggaataaca
acacttggagcacctatggatgttcaaatggttgatactattttttctgatgaagataaa
agatttatgttacattataattttccaccattttcaactggagaagtaagacctttaaga
ggccctggaagaagagagataggtcatggccatcttgcagaaagatcacataaaaattta
ataccttcagaatctgaatttccatatacaataagagttgtatctgaaatattagaatca
aatggttcatcttctatggctacagtatgttcagcttctttgtccatgatggatgccgga
atacctctaaaaaaacatgttgctggtgttgccatgggtttaatatttgaagaagataaa
aatgtagtgttaactgatattcttggaattgaagatcatttaggagatatggattttaaa
gttactggaacaagagaaggaataacggcttttcagatggatgtaaaagttgataaagta
aatgaagaaataatgcgtgaagctcttgatagagctaaaatcgcaagattaaaaatatta
aatttaatgtatgatgctatatctgaaccaagaccagaactttctccatttgtacctaaa
ataaaaaccattacaataccagtaaacaaaattggagatgtcattggacctggtggaaga
ataataaagaaaataaatgagacatataatacagagacatccattgatgatgaaggaatt
gttaaagttagtggtatggccgaagatatggtagataaagcaataaaatatataacaggt
ctcgtatctgaaatagaaaaaggaaaagtatatgaaggaaaaataaaaagagtagaaaaa
tacggagtttttgtggaagttttacctggaaaatcaggattattacatatttcgaatatg
tcaaaaaaaccaactgaattaaaaattgatgataaaataaatgtagaagtaataagtata
gaatctcaatctaaattccaattaaaagaagaaggatatgaaaaacctaaacgtgctcca
agaccagagaaaacttcaaatgataaaaatgattcaaataatgatgaaaaaaaagataaa
gatatagaaaaagaaaatgggggtaattaa
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