Oceanotoga sp. DSM 15011: OF820_04390
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Entry
OF820_04390 CDS
T08543
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ocs
Oceanotoga sp. DSM 15011
Pathway
ocs00521
Streptomycin biosynthesis
ocs00523
Polyketide sugar unit biosynthesis
ocs00541
Biosynthesis of various nucleotide sugars
ocs01100
Metabolic pathways
ocs01110
Biosynthesis of secondary metabolites
ocs01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ocs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OF820_04390 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OF820_04390 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OF820_04390 (rfbC)
Enzymes [BR:
ocs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
OF820_04390 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
UYP00927
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All DBs
Position
complement(886971..887501)
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AA seq
176 aa
AA seq
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MDIRELEIKNVYQIKNKLYEDKRGYFSEIYRKNDYEFLKTNFVQENYSFSNKYTLRGMHY
QIKKPQAKLIRCLNGQIIDVILDLRKNSETYLKALSIKLDKNYTLYIPKGIAHGFLALKD
ETIVYYKTDEYFNSNDEDGFIWKDPKIFEYWNLKEFNIKEEQLILSHKDKHWGYLR
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggatattagagaacttgaaataaaaaatgtttatcaaataaaaaataaattatatgaa
gataaaaggggatatttttcagaaatatatagaaaaaatgattatgaatttttgaaaact
aattttgttcaagaaaattattctttttcaaataaatatactttgagaggaatgcattat
caaataaaaaaaccgcaagcaaaattaataagatgtttaaatggtcaaataatagatgtt
atattagatctcagaaaaaattcagaaacttatttaaaagctttatctataaaattagat
aaaaattatacattatacattccaaaaggaatagcacatggatttttagctcttaaagat
gaaactattgtatattataaaactgatgaatattttaattctaatgatgaagatggattt
atatggaaagatccaaaaatatttgaatattggaatttaaaagaatttaatataaaagaa
gaacaattgatattgagtcataaagataaacattggggatacttaagatga
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