Oceanotoga sp. DSM 15011: OF820_08520
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Entry
OF820_08520 CDS
T08543
Symbol
rbsB
Name
(GenBank) ribose ABC transporter substrate-binding protein RbsB
KO
K10439
ribose transport system substrate-binding protein
Organism
ocs
Oceanotoga sp. DSM 15011
Pathway
ocs02010
ABC transporters
ocs02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ocs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
OF820_08520 (rbsB)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
OF820_08520 (rbsB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocs02000
]
OF820_08520 (rbsB)
Transporters [BR:
ocs02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
OF820_08520 (rbsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
Ribosomal_S2
NAD_binding_3
PucR
FAD_binding_4
DUF6520
Motif
Other DBs
NCBI-ProteinID:
UYO99119
LinkDB
All DBs
Position
1788827..1789693
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AA seq
288 aa
AA seq
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MKKTLLTLLALTLIMSIGFSFTLGLSVSTLNNPFFVALKDGAVEKAEELNIDLIVADARD
NPAKQLNDIEDMIQRKVDLIIINPTDSDAIASSVEEANDANIPVITVDRGSNGGKVLLHI
ASDNIAGGAMAAEFIAEKLNQKGKVIELVGIPGTSAARDRGAGFDQGISKYKDIKVVARQ
TANFNRAEGLVVMENLLQSNPDVNAVFAQNDEMALGAIEALKSAGKLKNVVVVGFDAVPD
AVKSVQNKEMAATIAQQPEKMGGLAVTKAVEYLNTMTVYFPVDLKLVK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacattattaacattattagccttaaccctcatcatgagtattggattctca
ttcacattaggtttatccgtatcaacactcaacaaccctttctttgtagcattaaaagat
ggtgcagtagaaaaagctgaagaattaaatatagatctaatagttgcagatgcaagagat
aaccctgcaaaacagttaaatgatatagaagatatgattcaaagaaaagtagatctaata
ataataaaccctacagactcagatgcaatagcatcatcagttgaagaagcaaacgatgca
aatataccagtaataactgtagacagaggctcaaatggtggaaaagtattattacatata
gcttctgacaatatagctggtggagcaatggctgcagaatttatagcagaaaaattaaat
caaaagggaaaagtaatagaattagtaggaatacctggaacatctgcagcaagagataga
ggagcaggattcgatcaaggaatatcaaaatacaaagatataaaagttgtagcaagacaa
acagcaaacttcaacagagcagaaggattagtagtaatggaaaatctattacaatcaaat
ccagatgtaaatgcagtatttgctcaaaatgatgaaatggcattaggtgcaatagaagct
ttaaaatctgcaggaaaactaaaaaatgtagttgtagtaggttttgatgcagtaccagat
gctgtaaaatctgttcaaaataaagaaatggccgcaacaatagctcaacaaccagaaaaa
atgggaggactcgcagtaacaaaagcagtagaatatctaaacacaatgacagtatacttc
cctgttgacttaaaacttgtaaaataa
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