Oceanotoga sp. DSM 15011: OF820_12585
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Entry
OF820_12585 CDS
T08543
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ocs
Oceanotoga sp. DSM 15011
Pathway
ocs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ocs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OF820_12585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocs03021
]
OF820_12585
03400 DNA repair and recombination proteins [BR:
ocs03400
]
OF820_12585
Enzymes [BR:
ocs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OF820_12585
Transcription machinery [BR:
ocs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OF820_12585
DNA repair and recombination proteins [BR:
ocs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OF820_12585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
Ribosomal_TL5_C
Motif
Other DBs
NCBI-ProteinID:
UYO99874
LinkDB
All DBs
Position
2638377..2639429
Genome browser
AA seq
350 aa
AA seq
DB search
MDILIKPEKFELIEQKEELNYNYARYELYPLEKGYAITIGNALRRVLLSSVPSLAITGMR
IPGQLHEFDVAEGIKEDLLEVTLNLKKVQIKIDDLKNLSKITDTIPLTITKKGPGEIKAG
DIQTPAGIEIANPEFTIAHFNSEKTIEIELFAEVGKGFIPSSELDHPTDVEYIFIDGVFS
PVTKVNFLTENIRVGKRTDYDKLILDIWTKKNITPEEALKEATAILMEHFIFIAKLWKDT
SIVEALEPVQDMGGAADESDKDDSEQNMFGLSSEIIETPIDNLDLTKRAKNCLKRERINT
VGELFKKTPEELMKIKNFGRKSLDEIKKELEDKFQIDYEKLYEEERRSSN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacatattaataaaacctgagaaatttgaattaatagaacaaaaagaagagctgaac
tataattatgcaagatatgaattatatccattagaaaagggatatgcgataactataggt
aatgctttaagaagagttttattatcatctgtaccctctttggctataactggaatgaga
attccagggcaattacacgagtttgatgttgctgaaggcataaaagaagacttactcgaa
gttactttaaatctaaaaaaagttcaaataaaaatagatgacttaaaaaatctatctaag
attacagatactattcctttaactataactaaaaaaggacctggagaaattaaagctgga
gatatacaaacaccagcaggtatagaaatagccaatccagaatttacaatagctcatttc
aattctgaaaagacaatagaaatagagttatttgcagaagttggaaagggatttatacca
tcttcagaattagaccatccaacagatgtagaatatatatttatagatggagtatttagt
ccagtaactaaagttaactttttaactgaaaatattcgtgtaggaaagagaacagactat
gataaattaatattagatatttggacaaagaaaaatataactccagaagaagctttaaaa
gaagctacagcaatattaatggaacattttatattcatagcaaaactttggaaagacaca
tcaattgttgaagcgcttgaacctgtccaggatatgggtggagctgctgatgagtctgat
aaagatgactcagaacaaaatatgtttggtctttcttcagaaataatagaaactccaata
gataatcttgatttaacaaaaagagctaaaaattgtttaaaacgtgaaagaataaatact
gttggagaactattcaaaaaaacaccagaagaattgatgaaaatcaaaaattttggcaga
aaatcacttgatgaaataaaaaaagaattagaagataagttccaaatcgactatgaaaag
ttatatgaggaagaaaggaggagctctaactaa
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