Octadecabacter sp. SW4: FTO60_00030
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Entry
FTO60_00030 CDS
T06209
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
oct
Octadecabacter sp. SW4
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oct03032
]
FTO60_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
oct03400
]
FTO60_00030 (gyrB)
Enzymes [BR:
oct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FTO60_00030 (gyrB)
DNA replication proteins [BR:
oct03032
]
Prokaryotic type
DNA Topoisomerases
FTO60_00030 (gyrB)
DNA repair and recombination proteins [BR:
oct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FTO60_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QEE34227
UniProt:
A0A5B9ENK6
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Position
4826..7243
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AA seq
805 aa
AA seq
DB search
MSENEQKKEEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADAVNVKIHDDGSVSVSDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDYLELRIWRDGKEHVARFEGGFTTEHLTVVGDCGDQTGTEVRFLASL
DTFSNRDYDFNTLEKRLRELAFLNSGVRIILTDERPAEHLRTELFYEGGVKEFVKYLDRS
KSSILPEPIFITGERDDIGIEVAMWWNDSYNEMVLPFTNNIPQRDGGTHMAGFRGALTRT
INNYAQSSGIAKKEKVSFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVENL
VGEKLAEWFEENPAIAKIVVGKIVEAAQAREAARKARELTRRKTAMDVNFLAGKLKDCSE
KDPAKTEVFLVEGDSAGGSAQTGRDRGTQAILPLKGKILNVERARFDRMLNSQEIGNLVM
ALGTGIGRDEFDISKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPELIEGGYLYIAQP
PLYKVSRGKSEVYLKDQAEMDDYLIQQGTEGALLKLGSGADMSGQDLVRVVEEARQLKRV
LDAFPTHYPRHILEQAAIAGAFVPGAVDSDLQGVADKVAARLDAIALEYEKGWQGRITQD
KGIRLARILRGVEEVRTLDGPVLRGGEARKTGQFTKNLQEVYDKPAQLHRKDRHQMIHGP
LDLLAAILEEGERGLTLQRYKGLGEMNPDQLWETTLDPDARTLLQVKIDDVAEADDLFTK
LMGDVVEPRREFIQQNALSVENLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaacgagcagaaaaaagaagaatacggcgcagattccatcaaggttctcaag
ggcctagaggccgtgcgcaagcgtccgggcatgtatatcggtgacaccgatgatggctcg
ggtttgcaccacatggtttatgaagtcgtggacaacggcattgacgaggctttggccggt
catgccgacgccgtgaacgtcaaaatccacgatgacggctccgtttctgtcagcgataac
gggcgcggcattcccgtcggcatccacgaggaagaaggcgtgtcggcggccgaagtcatc
atgacccaactgcatgctggcggtaaattcgacagcaattcctacaaggtgtccggcggc
ctgcacggcgtcggcgtatcggtggtgaacgcgctgtcggactatcttgaactgcgcatc
tggcgtgacggaaaagaacacgtcgcgcgttttgagggtggctttaccaccgaacacctg
acggtcgtgggtgactgcggtgatcagacaggaaccgaggtgcgtttcctcgccagcttg
gatacattttccaaccgcgactatgatttcaacacgctggaaaagcgcctgcgcgaactg
gcatttctgaactctggcgtgcgcatcatcctgaccgatgaacgccccgccgaacacctg
cgcaccgaactattctacgagggcggggtcaaggaattcgtcaaatatctggatcgctcc
aagtccagcattctgcccgagccgattttcattaccggcgagcgtgacgacatcggcatc
gaagtcgcgatgtggtggaacgacagctacaacgaaatggtgctgccctttaccaacaac
atcccacagcgcgatggcggcacccatatggcgggtttccgcggcgcgctgacccgcacc
atcaacaactacgcccaatccagcggtatcgccaaaaaggaaaaagtcagctttaccggc
gatgatgcgcgcgaaggtttgacctgtgtcttgtccgtcaaagtgcccgaccccaagttt
tccagccagaccaaggataaacttgtctcctccgaggtgcggcccgcggttgaaaacctt
gtcggtgaaaaactggccgaatggttcgaggaaaatcccgcgattgccaagatcgttgtg
ggcaaaatcgtcgaagccgcacaggcccgcgaagccgcccgcaaggcgcgcgaactgacg
cggcgcaaaacggcgatggatgtgaactttcttgcaggcaagctcaaggattgctcggaa
aaagacccggccaagaccgaagtctttttggtcgagggtgacagcgccggcggctctgcc
caaacgggccgtgaccgtggcacgcaggccattctacccctcaagggcaagatcctgaac
gttgaacgcgcccggttcgaccggatgctgaactctcaggaaatcggcaacctcgtgatg
gcgctgggcaccggcatcggccgcgatgaatttgatatcagcaaactgcgctaccacaag
atcgtcatcatgaccgacgccgacgttgacggcgcgcacatccgcacgttgctactgacg
ttcttcttccgtcaaatgccggaactgatcgaaggtggatacctctacattgcccagccg
ccgctttacaaagtgtcgcgcggcaagtccgaggtctacctcaaggatcaggccgaaatg
gacgattacctgatccagcaaggcaccgaaggggcgctcctgaaactgggcagcggcgcg
gatatgtccggccaggaccttgtgcgcgtcgtcgaagaggcgcggcagttgaaacgtgtg
cttgatgcctttccaacccattatccacggcacattctggaacaggccgccatcgccggc
gcctttgtgcccggagcggtagacagcgatttgcagggggtcgccgacaaggtcgccgcg
cgtctggatgccatcgcgctggaatacgagaagggctggcagggccgcatcacccaggac
aagggcattcgccttgcccgcatcctgcgcggcgtcgaagaagtgcgcacccttgatggc
cccgtgctgcgcggcggtgaggcacgcaagaccgggcagttcaccaagaacctgcaagag
gtctacgacaaacccgcgcaactgcaccgcaaggaccgccatcagatgatccacggcccg
cttgatctgctggccgcgattctggaagagggcgagcgcggcttgaccctgcaacgctac
aaggggctgggtgaaatgaaccccgatcagctgtgggaaaccacgcttgaccctgacgcg
cgcacactgctgcaagtcaagatcgacgacgtcgccgaggccgatgacctgttcaccaag
ctgatgggcgatgtcgtggaaccacggcgcgaatttatccagcaaaacgcgctatctgtc
gaaaacctcgacttctaa
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