Octadecabacter sp. SW4: FTO60_01840
Help
Entry
FTO60_01840 CDS
T06209
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
oct
Octadecabacter sp. SW4
Pathway
oct03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FTO60_01840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oct03021
]
FTO60_01840
03400 DNA repair and recombination proteins [BR:
oct03400
]
FTO60_01840
Enzymes [BR:
oct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FTO60_01840
Transcription machinery [BR:
oct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FTO60_01840
DNA repair and recombination proteins [BR:
oct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FTO60_01840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
QEE34559
LinkDB
All DBs
Position
358146..359162
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLDVKPGNDPTRQATVTAEPLERGFGLTLGNALRRILMSSLQGAAIT
TVQIDNVLHEFSSVAGVREDVTDIVLNLKGVAIRMEVEGPKRLSVQAKGPGVVTAADISE
SAGIEVLNKDHVLCHLDDGADLYMELTVNTGKGYVSADKNKPEDAPIGMMAIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSITPDDAVAFAARILQDQLSIFVNFDEPESAQ
AQSDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaattgggctgagctcattaaacctacacagcttgacgtcaagccgggc
aatgacccgacccgtcaggcaaccgtcactgccgaaccgctggaacgcggctttggtctg
acccttggcaacgcgctgcgccgtatcctgatgtcatcgctgcaaggcgccgctatcacg
accgtgcagatcgacaatgtgctgcacgaattctccagcgttgctggggtgcgtgaagac
gtgaccgatatcgtgctgaacctcaagggcgtcgcgatccgcatggaagtcgaaggcccc
aagcgtctgtccgttcaggccaaaggcccgggcgttgtcaccgctgccgatatttccgaa
agtgcaggcatcgaagtgctgaacaaggatcacgtgctgtgtcaccttgatgatggcgcc
gatctttatatggaactgaccgtgaataccggtaagggctatgtctcggctgacaagaac
aagcccgaagatgcgcccatcggcatgatggccatcgacgcgatctattcgccggtcaag
aaggtcagctatgacgtgcagccgacccgcgaaggtcaggtgcttgattatgacaagctg
accatgaaagtcgaaacggacggatccatcacgcccgatgatgccgtggcctttgccgca
cgcatcctgcaggaccagctgtcgatctttgtgaacttcgacgagccagaaagcgcgcag
gcccagtccgacgacgatggtctggaattcaacccgttgctgctcaagaaagttgacgag
cttgaactgtcggtccgttcggccaactgcctcaagaacgacaatatcgtctacatcggt
gatctgatccagaaaaccgaagccgaaatgctgcgcacccccaactttggccgcaaatcc
ttgaacgagatcaaggaagtgctgtcgggcatgggtctgcaccttggcatggacgtcgaa
gactggccgccggacaacattgaagacctggccaagaaattcgaagaccagttttaa
DBGET
integrated database retrieval system
