Octadecabacter sp. SW4: FTO60_04125
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Entry
FTO60_04125 CDS
T06209
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K23237
AraC family transcriptional regulator, melibiose operon regulatory protein
Organism
oct
Octadecabacter sp. SW4
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oct03000
]
FTO60_04125
Transcription factors [BR:
oct03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FTO60_04125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
SelB-wing_3
IF2_N
Mpt_N
YnaL
Motif
Other DBs
NCBI-ProteinID:
QEE34973
LinkDB
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Position
complement(815821..816792)
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AA seq
323 aa
AA seq
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MASGKTNHQTCIGLLCLYCLGSPQAHRPYPIPRSLPMPTPPKISESVDVFSHGRDVFIES
HVPWVDSRFYHAHPSIEINYLRDCEMRYSFSGDPVDVPRERLCMFWAAYPHRVTHVFGQG
RITNAYVTLQQFLNWSLPPDMVDQVMSGAIICSLNLDPLDQPLVARWANELDNSNPELQR
LHRHEVRARLLRLGIEGWGQISPPRTTSGGMRIGGRAVESFDAMMRFVASNMFEPITVQD
VADAAGISRNYAITLFKKMLGMTVKSYLSDLRIRHAKMLLAETDNKIVSVAFDCGFVSLS
SFYEAFGKATGQSPAAYRDTHMT
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggaaaaaccaaccatcaaacctgtattggattgctttgcctatattgtcta
ggatcaccacaggcacaccgcccctacccgattccaaggagtttgcccatgccgacaccg
ccaaaaatttcggagtctgtcgatgtgttttcacatgggcgcgatgttttcatcgaaagc
cacgtgccctgggtggacagccggttttaccacgcgcatccctcgatcgagatcaattat
ctgcgcgattgcgagatgcgctattcgttctcgggcgatccggtcgatgtcccacgcgaa
aggctgtgcatgttctgggccgcctatccgcaccgtgtcacccatgtgttcggccaaggg
cggatcaccaacgcctatgtgaccttgcagcagtttctgaactggtccctgccgcctgac
atggtggatcaggtgatgtcgggcgcgatcatttgttcactaaaccttgatccgctggat
caaccgcttgtggcgcgctgggccaatgaactggacaacagcaaccccgaattgcagcgt
ctgcaccgccacgaggtgcgcgcgcgccttctgcggcttggcatcgaaggctggggccag
atcagcccgccgcgcacgacctcgggcgggatgcggatcggcggacgggcggtcgagagt
ttcgacgcgatgatgcggtttgtcgcctcgaacatgtttgagcccatcaccgtgcaagac
gtggcagatgcggcggggatttcacgcaactatgcaattacgctattcaaaaagatgctg
ggcatgaccgtcaaaagctatctgtccgacctgcgtatccggcacgccaagatgcttttg
gccgaaaccgacaacaagatcgtgtcggtggcttttgactgcggatttgtgtcgctgtcc
tcgttctacgaggcttttggcaaggccacgggccagtcgcccgcagcctaccgcgacacg
cacatgacctga
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