Octadecabacter sp. SW4: FTO60_05640
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Entry
FTO60_05640 CDS
T06209
Name
(GenBank) RTX toxin
KO
K20276
large repetitive protein
Organism
oct
Octadecabacter sp. SW4
Pathway
oct02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FTO60_05640
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_6
Big_3_3
BapA_N
DUF2808
Ribosom_S12_S23
Motif
Other DBs
NCBI-ProteinID:
QEE35238
UniProt:
A0A5B9EPX4
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All DBs
Position
1126936..1130418
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AA seq
1160 aa
AA seq
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MSTIDFVVRDSAGNIERGSVGEGGTSSTVVVGAGQDVSLNLSRGQILSYSREGQALNVVL
IDGSVITIEGFFSPEGMIENRLFVSSSSRLAEVDLVSDGTGIYQAQYVDAAEYGKWSPDD
DLYFVRGPEVQLADAYDAAVYEVGDDEVGMLATPLLGGIGGIGSALGLGGAVVGGGVILG
GGGGGSNPAPTVTLTSGTEGAGDFVNEADHADGVEIGGEGDVGATVAVTIAGVTQTTTVA
DDGTWEVIFSPQEILPGEYETDVSVVITNENGSGTATDVLIVDTIAGLGFDTSTVEGDGI
INAAEAVDGFTLTGTTEAGSSVVVTIDGVDYDAVVTGTSWTLVVGAGVVAGGEYDLAVTA
SSTDPYGNTTSITQTIEIDTETSVAFSGDAVEGDNTVNASEASNGVTLNGTAQAGSNVMV
TLGAVTLPAAVDAAGNWSVDMPAGALAAGEYTATATAVATDANGNAATTTMSFEVDTETS
VTFGGPDAGADGVINAVEHADGVTLSGTAEPGATVVVNFGTGTQTVVAGAGGAWAADFAA
SYVPTGEADVAVSVSATDLAGNTATTTGSVTMDTFVNTLDVTGDQIGGADGVVNFDEVGQ
AITVSGAVEPGSTVTVKLGNVNMNASVDGTGNWTVTYPAGTLPAGDYTTTMIVTAIDAAG
NTSSLSESVRVDTVAGDLALSATPIEGDDVINFVEESDGVVISGTATAGLMVTVTLDGVE
HFALAGPTGQWSTTYYSDEINNGTYNADITAQITDAAGNTKLVTDVVKVDTQVDNLAFAG
GDISADGIISAADAAGSVVLTGTVEPGSSVVVTMGGASRTVTAGSNGQWSATFTDAMIAN
GEYSDVAVTATATDPAGNVETISTTVDIDTIVSTLTVDGPVEGNDVVSAAEASDGITLNG
MVEAGSTVMVTFEGRTRAATVAADGNWTVNFAAGEIPAGEYETTVSILATDHVGNTSTIT
DTFVVDTLAPEAPVIDKLTITPDGVENVFVADGDNAISVATIDANGNATQTHAAGEGFDL
GSELLFSFDTALSDGTNMIVTETDANGNAGATLVVTEVDNQGGGSAAVSLGGDLGNYDIS
MIDLSFDEASVLNITAAQLEAMSDNTNDLYVRGGSDDQVNAIGANNTFTSTTVEGTTYDI
YTMGDEDGMLYIEQGINVTY
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattgatttcgttgtccgtgattcagcgggcaatatcgaacgcggttctgtc
ggcgaaggcggcacgtcttcgacggtggttgtaggggcggggcaagatgtttccttgaac
ctgagtcggggtcaaatcctgtcctacagccgtgaagggcaggcattgaatgtggtcctg
atcgacggctcggtcatcaccatcgaggggttcttttcccccgaaggcatgattgaaaac
cggttgttcgtgtcttccagtagccgcttggccgaggttgatctggtgtctgatggcacc
ggtatttaccaggcgcagtatgttgatgcggcagagtatggcaaatggagccccgacgac
gatctgtatttcgtgcgcggccccgaagtgcaattggcagatgcctatgatgcagccgta
tacgaagtcggcgatgacgaagtcggcatgctggcgaccccgcttctgggcgggatcggt
gggattgggtcggcgcttggtcttggtggtgcggtcgtcggtggtggcgtcattctgggt
ggcggcggtggcgggtcaaaccctgcgcccacagtcaccctgacgagcggcaccgagggt
gctggcgatttcgtcaacgaagcggatcacgccgacggcgttgaaatcggcggcgaaggc
gatgtcggcgcgactgtcgcagtcacgattgctggcgtcacacaaaccaccacggttgcc
gatgatggcacctgggaggtgatcttttccccacaggaaatcctccccggggaatatgaa
accgacgtttcggtcgtgatcaccaacgaaaacggtagcggcacggccacggatgttctg
atcgtggacaccattgccggtcttggctttgacacatccactgtcgaaggcgacggtatc
atcaatgcggccgaggcggtcgatgggttcaccctcaccggcacgaccgaggcgggttca
agcgttgtcgtcacaatcgacggcgtcgattacgacgcggttgtcacgggcacctcgtgg
acactggttgttggcgcgggtgtggttgcaggcggcgaatatgatctggcggtcaccgcg
agttcgaccgacccctatggcaacaccaccagcatcacgcaaaccatcgaaattgatacc
gaaaccagcgttgccttttcgggcgatgcggtcgaaggcgacaataccgtcaacgcgtcc
gaggcaagcaatggcgttaccctgaacggcacggcgcaggccggatcgaacgtcatggtc
acgcttggcgcggtcacacttccggcggcggtcgacgcggctggcaattggagcgtggac
atgcccgcgggcgcattggcggccggtgaatacaccgccacagccacagccgtcgcaacg
gatgccaatggcaacgcggccacgacgaccatgtcgttcgaggttgataccgaaacaagc
gttacctttggtggaccggacgcaggggcggacggcgtgatcaatgcggtcgaacatgcc
gatggcgtgaccttgagcggcaccgccgagccgggcgcgaccgtggttgtcaactttggc
accgggacgcaaacggttgtcgcgggcgccggtggcgcctgggcggcagatttcgctgca
agctacgtgccaacgggcgaagccgacgtggccgtttcggtcagcgcgaccgatctggcg
ggcaacacggcgaccacgaccggcagcgtcacgatggatacattcgtcaatacccttgat
gtcaccggcgatcagatcggtggtgccgatggtgtggtcaactttgacgaagtcgggcag
gcgatcactgtttcgggggcggttgagcccggctcgaccgtgactgtcaaacttggcaat
gtgaacatgaacgccagcgttgacgggacgggcaactggacggtcacttatcctgcgggc
accctgcctgcgggtgattatacgaccacaatgatcgtcacggccatcgacgcggcgggc
aacacatccagcctgagcgaaagcgtgcgtgtggataccgtcgccggcgatctggcgctc
agtgcgacaccgatcgagggcgatgatgtcatcaactttgtcgaagaaagcgacggcgtg
gtcatttccggcaccgccacggcgggcctgatggtcaccgtgacgctggacggggtggaa
catttcgcccttgctggccccaccggccaatggtccacgacctactatagcgacgagatt
aacaatggcacgtataacgctgatatcacagcgcaaatcaccgatgcggcaggcaatacc
aagctagtcaccgatgtggtcaaagtggatacgcaggtcgataatctggcctttgccggt
ggcgacatttccgccgacgggatcatcagcgctgccgatgcggcgggcagtgttgtcctg
acgggcacagttgaaccggggtcgtccgtggttgtcacgatgggcggcgcgtcgcgcacc
gtcacggcaggcagcaacggccagtggagcgcgacctttaccgatgcgatgattgccaac
ggggaatacagcgatgtggccgtcacggccacggcgaccgatccggcgggcaacgtcgaa
acgatcagcaccaccgtcgatatcgacacgatcgtcagcacgctgacggtcgatggccct
gtggagggcaacgatgttgtcagcgccgccgaggccagcgatggcatcaccctcaacggg
atggtcgaggcgggatcgaccgtcatggttacctttgaaggcaggacgcgcgccgcgaca
gttgccgctgacggaaactggaccgtgaactttgccgctggcgaaatccccgccggtgaa
tatgaaaccaccgtgtcgatccttgcgaccgatcacgtgggcaacaccagcacgatcacc
gacacctttgtagtcgacaccctggcacccgaagcccccgtgatcgacaagctgacgatc
acgccggatggggtggaaaacgtctttgtcgcggatggtgacaatgcgatttcagttgcc
accatcgatgccaacggcaacgcgacccaaacacacgccgcgggcgagggttttgatctg
ggcagcgagctgttgttcagctttgacaccgccctgtcagatgggaccaatatgatcgtc
accgaaactgacgccaacggcaacgcgggcgcgacgctggttgtcaccgaggtggacaat
cagggcggtggcagtgctgcggtgagtttgggtggtgatctgggcaattatgacatcagc
atgattgatctatcctttgacgaggccagcgtgctcaatatcacggcggcccagcttgag
gcgatgtccgataacaccaacgacctttatgtccgcggcggcagcgacgatcaggttaac
gcgatcggtgcgaacaacaccttcacgtcgaccaccgtcgaaggcaccacctatgacatc
tacacgatgggtgacgaggacggcatgctttatatcgagcagggcatcaacgttacttac
tag
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