Octadecabacter sp. SW4: FTO60_10480
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Entry
FTO60_10480 CDS
T06209
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
oct
Octadecabacter sp. SW4
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oct03000
]
FTO60_10480
Transcription factors [BR:
oct03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
FTO60_10480
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_13
TetR_C_9
Motif
Other DBs
NCBI-ProteinID:
QEE36098
LinkDB
All DBs
Position
complement(2134802..2135404)
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AA seq
200 aa
AA seq
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MSKSETRIQKKNQATILAAGLEVFSQYGFRGSTLDMIAEVAGLSKPNLLYYFSSKDAIYK
TLLAQLLENWMEPVYAINADGDPVEEILNYAKLKLKMSQNFPRESRLFANEILQGAPQIS
DVLHGELRRAVTDLAKVIEGWIAAGRIRPVDPYHLVFSIWSLTQHYADFDVQIRAIMGDT
DPMIGAEHHIEDILRRLLTL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatccgaaacacgcatccagaaaaagaaccaggccacgattcttgcggcaggg
cttgaggttttttcccaatacggatttcgcggatcgacattggatatgattgccgaggtc
gccgggctgtccaagccgaatctgctctattatttttcgtccaaggacgcgatctacaag
acccttttggcccagcttctcgagaactggatggagcctgtttacgcgatcaatgcggac
ggtgatccggtcgaggaaatcctgaactatgcaaagctcaagctgaagatgagccagaat
ttcccgcgtgaaagccgcctttttgccaacgaaatcctgcaaggcgcgcctcaaatcagt
gatgtgctgcacggtgaattgcgccgcgccgttaccgatttggcaaaggtcatagagggc
tggattgcggcggggcgtatccgccctgtcgatccctatcatctggtgttttcgatctgg
tcgctgacccagcattatgccgattttgacgtgcaaattcgcgctatcatgggcgacacc
gacccgatgatcggcgcagaacatcacatcgaagacatcctgcgccgcctgctgacgctc
tag
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integrated database retrieval system
