Octadecabacter sp. SW4: FTO60_12355
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Entry
FTO60_12355 CDS
T06209
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
oct
Octadecabacter sp. SW4
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oct03016
]
FTO60_12355 (truA)
Enzymes [BR:
oct01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FTO60_12355 (truA)
Transfer RNA biogenesis [BR:
oct03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FTO60_12355 (truA)
Prokaryotic type
FTO60_12355 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QEE36433
LinkDB
All DBs
Position
2502229..2502996
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AA seq
255 aa
AA seq
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MPRYALKVEYDGGRFSGWQRQADQPSVQGAIEAALARLEDGPHTIAAAGRTDAGVHATGQ
VAHCDLTRNWEPFRLSEALNYHLKPNPVAITACTVVADDWHARFSAIERRYVFRLIARRA
PLTFEKGQAWRVPHPLDGAAMQAGADQLLGRHDFTTFRSSICQANSPLRTLDELTISDIA
RDGYQEFHFHVRARSFLHNQVRSFVGTLERVGAGAWSPDDVGAALAARDRAACGPVCPPD
GLYLAGVAYSDDPFA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcccagatatgccctcaaggttgaatatgatggcggccggttttcgggctggcagcgt
caggccgaccagccatcagtgcagggcgcgatcgaggcggccttggcgcggcttgaggat
ggcccccacacgatcgccgcggcggggcggacggacgcgggcgtgcatgcaaccggacaa
gtggcgcactgcgacctgacccgcaactgggagccgttccgcctgtccgaggcgctgaat
taccacctcaaacccaaccctgttgccataacagcctgcaccgtggtggcggatgactgg
cacgcgcggttttcggccattgagcggcggtatgtctttcgcctgatcgcacggcgcgcg
cctttgacctttgaaaaagggcaagcgtggcgcgtgccacaccctttggacggggcggcg
atgcaggcgggggcggatcaattgctggggcggcacgattttacaacctttcggtcctcg
atctgtcaggccaatagcccgctgcgcacgctggatgaattgacgatctcggacatcgcc
cgggacggatatcaggagtttcactttcacgtccgcgcgcgctcgttcctgcacaatcag
gtgcgcagttttgtcggcacgctggaacgggtcggcgcgggggcttggtcccccgatgac
gtgggcgcggcgctggccgcccgcgatcgcgcagcctgtggccctgtctgtccgcccgat
gggttgtatttggcgggtgtcgcatactccgacgatcccttcgcctaa
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