Octadecabacter sp. SW4: FTO60_12870
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Entry
FTO60_12870 CDS
T06209
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
oct
Octadecabacter sp. SW4
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oct03009
]
FTO60_12870 (rimO)
Enzymes [BR:
oct01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FTO60_12870 (rimO)
Ribosome biogenesis [BR:
oct03009
]
Prokaryotic type
ribosomal protein modification factors
FTO60_12870 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
DUF6802
Motif
Other DBs
NCBI-ProteinID:
QEE36527
LinkDB
All DBs
Position
2608791..2610164
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AA seq
457 aa
AA seq
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MSQNPPNLRPDLANARISETRREGQPTIGMVSLGCPKALVDSERILTRLRAEGYAISPDY
AGADAVIVNTCGFLDSAKAESLDAIGEALVENGKVIVTGCLGAEPDYIREHHPKILAVTG
PHQYEQVLDAVHDVVPPSPDPFIDLLPASGVSLTPRHYSYLKISEGCNHKCKFCIIPDMR
GRLASRPAKAVLREAEKLVENGVKELLVISQDTSAYGTDWPADQRRGLTEQPITTLARDL
GGLGAWVRLHYVYPYPHVREIIPLMTDGLILPYLDIPFQHAHPDTLRRMARPAHAERTLD
RIAEWRGICPDITLRSTFIVGYPGETEAEFQHLLDWMDEAQLDRVGCFQYEDVAGARSNA
LPDHVADEVKQERWDRFMEKAQAISEAKLAAKVGQRMEVIVDDIDADGIATCRTKADAPE
IDGNLFIDEGTEGLSVGDIVTVEVDEAGEYDLWGCLV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaacccgcccaatctccgccccgatcttgccaatgcgcgcatcagcgaaacc
cgccgcgagggccagccgaccatcggcatggtgtcgcttggctgccccaaggcgctggtc
gatagcgaacgtatcctcacccgcctgcgcgccgagggctacgcgatttcgcccgattac
gccggtgccgatgcggtgatcgtcaacacctgcgggttccttgacagcgccaaggccgaa
agccttgatgcgattggcgaggcgctggttgaaaacggcaaggtcatcgtcaccggctgt
ctcggggccgagccggattatatccgcgaacaccacccgaaaatcctcgccgtgacggga
ccgcaccaatacgaacaggtgctggatgccgtgcacgatgtggtcccacccagccccgat
ccgttcattgatctgctgcctgcatcgggcgtgtccctgaccccgcgccactatagttac
ctgaaaatctccgagggctgtaaccacaagtgcaagttctgcatcatccccgacatgcgc
gggcggctggcgtcacgccccgccaaggccgtgctgcgcgaagcggaaaagctggttgaa
aacggggtgaaggaactgctggtgatcagtcaggataccagcgcctatggcaccgactgg
cccgccgaccagcgccgcgggctgaccgaacaaccgatcacaacgctggcccgcgatctc
ggtggccttggtgcatgggtgcgcctgcactacgtttacccctacccccatgtgcgcgag
attattccccttatgaccgacgggctgatcctgccctatctggatatcccgttccaacac
gcccaccccgacaccctgcgccgcatggcccgccccgcgcacgccgaacgcacgcttgat
cgcatcgctgaatggcgcgggatttgccccgacatcaccctgcgctcgacctttatcgtt
ggctaccccggcgaaaccgaggccgagtttcagcacctgctcgactggatggacgaggca
caactcgatcgcgtcggctgttttcagtatgaagacgtggcaggcgcacgcagcaacgcc
ctgcccgatcatgtggccgatgaggtcaaacaagagcgctgggaccgtttcatggaaaaa
gcccaagcgatttccgaagcgaaactcgccgcaaaagtgggccagcgcatggaggtgatc
gtggacgacatcgacgccgacggcatcgccacctgccgcaccaaggccgacgcccccgag
atcgacgggaacctgtttattgatgaagggaccgaagggttatcggttggggatatcgtg
acggtcgaagtggacgaagcaggcgagtatgatttgtggggatgtttggtttga
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