Octadecabacter sp. SW4: FTO60_14340
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Entry
FTO60_14340 CDS
T06209
Name
(GenBank) efflux RND transporter permease subunit
Organism
oct
Octadecabacter sp. SW4
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Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QEE37368
UniProt:
A0A5B9EVF3
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Position
2892656..2896027
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AA seq
1123 aa
AA seq
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MGRADGLLSYFTRHRTAANLLLVVLLAAGIAAMPKMRAQFFPDVIIDSVSVSVAWSGAGA
EDVDAAIVQVLEPALLSVDGVTASSARSSEGRASISLEFEPGYDMAQAAEDVQIAVDATG
NLPDDSEDPVVRRGAWSDRVTDVVITGPVGTEQLGRFADELVTRLFAAGVTRATIRGVAA
PSTVIEVPSLSLIQHDVTMSEIAAAIGQEVNADPAGDVSGASRVRTGVEKRAADEIAGIV
LRTNADGSTLAVGDVARINVQGVDRERAYFVGNDPAITIRVDRSDKGDAIELQKRVEEVA
AAMQATLPAGVTVELIRTRADYITDRLNILLENGALGLALVVGLLFLFLNARTAFWVAAG
IPVAMFAAIALMYMAGLTINMISLFALIITLGIVVDDAIVVGEHADYRVRRLGEDPVEAA
ENAARRMFSPVFSATITTVIAFFGLVAIGGRFGDLISDIPFTVIVVLLASLVECFLILPN
HMSHALAPSARGKWYDAPSRFVNRRFDWVRENLFRPMMAGVIRARYPVMAGVFVILASQV
SLFIKGDVQWRFFNAPERGSVTGNFAMLPGATRDDTLAMMRELQRATNDLGAEYEAEYGI
NPIDYVIAEVGGNSGRGLSGADTKDADQLGAISIELIDADLRPYSSFAFVAALQDAVVQH
PMAETVSFRSWGSGPGGDDIDIQLYGATAETLKSASEALKTALAQFPEVSAVEDTLAYDK
EELILDLTPQGQALGFTIDGLGRVLRDRLNGIEAATYPDGPRSATIRVELPAGELTADFL
ERTQMRTATGDYVPLADIVSVDRRTGFSTVRRENGIMLISVNGDLTDDDADRAAEVTKQI
NETILPQIEQNFGVSTNLSGLSEQEDAFLNDARTGLIFVLTGIFLTLAWIFSSWTRPLVV
MAIIPFGLIGTIYGHNLWGIPMSMFSIVGLIGMTGIIINDSIVLVTTIDDYAKTRGLIPA
IIDGACDRLRPVLLTTLTTVLGLAPLLYEGSSQAEFLKPTVITLVYGLGFGMVIVLLVVP
ALMAMQQDIHKQVRAARRALRSGDAGARLPAGIAALGAAALFAVLMAPMIITGAPLPAVA
SALPMLNGGTGIAFGLFAVSVAIWVTLVYFASVALTLALRKTA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgctgacggattgctgtcgtatttcacccgccaccgcacagcggcgaacctg
ctgcttgtcgtgctgctggccgccggcattgcggcgatgccaaaaatgcgcgcgcagttc
tttcccgatgtgatcatcgactccgtcagcgtgtcagtcgcatggtcgggcgcaggagcc
gaagacgtcgatgcggccattgtgcaggtgttggaacccgctttgctgtcggtcgatgga
gtcaccgcaagttcggcacgttccagcgaaggacgtgcgtcaatttcgcttgagtttgag
ccgggctatgacatggcgcaggccgccgaggacgtgcagattgctgtcgatgccacaggc
aacctgcccgacgattccgaagaccctgtcgtgcgccgcggcgcctggagcgatcgggtt
accgatgtggttatcaccggccccgtgggcaccgagcaacttgggcgctttgctgatgaa
ctggtgacgcggctgtttgcggcaggggtcacccgcgccacaattcggggtgtcgccgcc
cccagcacggtgatcgaagtgccctcgctttcgctgatccaacatgacgtcaccatgtcc
gagattgcggctgcaatcggccaggaggtcaacgccgacccggccggtgacgtcagtggc
gcttcgcgcgtgcgcacgggcgtggaaaaacgcgcggcagacgaaatcgcggggatcgtg
ctgcgcacgaacgcggatggatcgaccctggctgtcggtgatgtagcgcgcatcaacgtg
caaggcgtcgaccgcgagcgcgcctatttcgttggcaacgatccggccatcaccatccgc
gttgaccgctctgacaagggcgatgcgattgaactgcaaaagcgtgtggaagaggttgcc
gcggctatgcaggcgaccctgcccgccggggttaccgttgaactgatccgcacgcgcgcg
gactacatcaccgatcgtttgaatatcctgctggagaacggcgcactgggcctcgcgctg
gtggttggcctgctgtttcttttcctgaacgcgcgcaccgcgttctgggtcgcggcgggt
attcccgtggcgatgttcgccgcgattgcgctgatgtatatggcggggctgacgatcaat
atgatcagccttttcgcactgattatcacccttgggatcgtggtggacgacgccatcgtc
gtgggtgaacacgccgattatcgcgtcaggcggctgggcgaagatccggtcgaggccgcc
gagaacgcagcgcgccgcatgttcagcccggtcttttccgccacgatcaccaccgtgatc
gcctttttcggtctggtggcgattggcgggcggtttggcgatctgatttccgacattccc
tttacggtgatcgtcgtgttgctggcgtcactggtggagtgtttcctgatcctgcccaat
cacatgtcacacgctctcgcacccagcgcacgtggcaagtggtatgacgcgccttcgcgt
tttgtgaaccggcgttttgactgggtgcgtgaaaacctgttccgcccgatgatggcaggg
gtgatccgggcgcgctatcccgtgatggccggagtgttcgtgatcctcgccagtcaggtc
tccttgttcatcaagggtgacgtgcagtggcggttcttcaacgcgcccgagcggggctcg
gtaacaggcaatttcgcgatgctgccgggggccacgcgcgacgacacattggcgatgatg
cgcgaacttcagcgcgccacaaacgatctgggcgccgagtacgaggccgaatatggtatc
aacccgatcgattatgtgattgccgaagtcggcggcaactccgggcgcggtctatcaggg
gccgacactaaagacgccgatcaactgggggcgatttccatcgaactgatcgacgccgat
ctgcgcccctactccagctttgcctttgtcgcggccctgcaagacgcggtggtgcaacat
ccgatggccgaaacggtcagctttcgcagttggggcagcggaccgggtggcgatgatatt
gacatccagctttacggcgcgacagccgaaaccctgaaatccgcctccgaggcgctgaag
accgcgcttgcacagtttcccgaagtgtctgccgtcgaagacacattggcctatgacaaa
gaggaactgatccttgatctgacgccgcaagggcaagcgcttgggtttacgattgacggg
ttggggcgtgtgctgcgcgaccgcctgaacgggatcgaggccgcgacctaccccgacggc
ccgcgcagtgcgactatccgcgtggaactacccgctggcgaactaaccgccgatttcctt
gagcgcacccagatgcgcactgcgacgggtgattacgtgccgctagccgatatcgtatcg
gtggaccggcgcaccggattttcaaccgtgcgacgcgaaaacggcatcatgctgatttcg
gtcaatggtgatctcaccgatgacgatgccgaccgcgccgccgaagtgaccaaacagatc
aacgaaacgatcctgccccagatcgagcagaatttcggggtcagcaccaatctgtcgggc
ctcagcgagcaggaagacgcattcctgaatgacgcgcgcaccggtctgatttttgtgctg
acaggcattttcctgacgctcgcttggatattctcaagctggacgcgcccactggtggtc
atggcgatcatcccctttggactgatcggcacgatttacgggcataacctgtggggcatc
ccgatgagcatgttctcgattgtcggattgatcgggatgacagggatcatcatcaacgat
tccatcgtgctggtgacgacgattgacgactacgcgaaaacgcgcgggctcatcccggcg
atcattgacggggcttgcgaccgtctgcgccccgtcttgctgacgaccctgaccacggtt
ctgggccttgcgccgctgctttatgaagggtccagtcaggccgagttcctgaagccgacc
gtgattacactggtttatggtcttgggttcgggatggtgatcgtgctgctggtcgtgcct
gcattgatggcgatgcagcaggatattcacaaacaggttcgcgccgcccgccgtgcgctg
cgcagtggtgacgcgggcgcccgtttacctgccggaatcgcggcccttggggctgccgct
ttgttcgccgtgctgatggcccccatgatcatcaccggcgcgccgctgcctgccgttgcc
agcgcgctgcccatgttgaacggcgggacgggcattgcattcgggttgttcgcggtcagt
gtcgcgatatgggtgacgctggtttatttcgcctctgtcgcgctgacccttgccttgcgc
aaaacggcctag
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