Octadecabacter sp. SW4: FTO60_15015
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Entry
FTO60_15015 CDS
T06209
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oct
Octadecabacter sp. SW4
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oct03016
]
FTO60_15015 (truB)
Enzymes [BR:
oct01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FTO60_15015 (truB)
Transfer RNA biogenesis [BR:
oct03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FTO60_15015 (truB)
Prokaryotic type
FTO60_15015 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QEE36903
UniProt:
A0A5B9EPZ4
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All DBs
Position
3022972..3023874
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AA seq
300 aa
AA seq
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MARKRKGRDISGWLVVDKPAGLTSTAVVNKVRWAFDAKKAGHAGTLDPDATGVLAIALGE
ATKTVPYITDALKAYTFTVRLGQSTNTDDAEGEVTATSDTRPTDDEIKAALGQFVGDIMQ
VPPAFSAVKIDGQRAYKRARDGEDFEIAARALWVEELLLIDRPDPDHVTLEMTCGKGGYV
RAIARDLGAALGCYGHVRELRRIWSGPFDVADAITLDQIDAHAKSPALDAFLRPLEEGLQ
DLPQVHCPADSVTKLRNGNPAMVMGDVEYGDECWAAHDGRAIAVGVFKGGELHPSRVFAA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaacgcaaggggcgcgacatttccggctggctggtcgtggacaagcccgcg
ggcctgacatcaacggccgtggtgaacaaggtgcgctgggcctttgacgccaagaaggcg
ggccatgccggcaccctcgatcccgatgcgaccggcgttttggctatcgccctgggcgag
gcgaccaagaccgttccctatatcaccgatgcgctcaaggcctacacctttactgtccgg
ctgggccaatctaccaacaccgatgacgccgagggcgaagtgaccgccaccagtgacacc
cgccccacagatgatgaaatcaaagccgcactgggtcagttcgtcggcgatatcatgcaa
gtgccgcctgcattttccgccgtaaaaatcgacgggcaacgcgcctacaaacgcgcccgc
gacggcgaggacttcgagatcgccgcgcgcgccctttgggtcgaggaactgctgctgatc
gaccgccccgaccccgatcatgtcacgctcgagatgacctgcggcaaaggcggctacgtg
cgtgccatcgcccgcgatctgggggcggcactgggttgctatggccatgtgcgcgagttg
cgccgcatctggtctggcccctttgatgtggccgatgccatcacgctggaccagatcgac
gcgcatgccaaatcacccgcgcttgatgcctttctgcgcccgcttgaggaaggactccaa
gacctgccacaggtccactgccctgccgacagtgtcacgaaattgcgcaacggcaatccg
gcgatggtcatgggcgatgtggaatacggcgacgaatgttgggccgcccacgatggccgt
gcgatcgctgtgggcgtgttcaagggcggcgaactgcacccaagccgggttttcgccgcc
taa
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